RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 C19orf18Q8NEA5 215 aa16.2■□□□□ 0.18
UPF1-209ENST00000600310 DEFB108BQ8NET1 73 aa16.2■□□□□ 0.18
UPF1-209ENST00000600310 C1orf159Q96HA4 380 aa16.2■□□□□ 0.18
UPF1-209ENST00000600310 TMEM246Q9BRR3 403 aa16.2■□□□□ 0.18
UPF1-209ENST00000600310 ZNF696Q9H7X3 374 aa16.2■□□□□ 0.18
UPF1-209ENST00000600310 SF3B6Q9Y3B4 125 aaKnown RBP16.2■□□□□ 0.18
UPF1-209ENST00000600310 ITPR3Q14573 2671 aa16.2■□□□□ 0.18
UPF1-209ENST00000600310 C3orf80F5H4A9 247 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 AKR7A2O43488 359 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 NOS1APO75052 506 aaPredicted RBP16.19■□□□□ 0.18
UPF1-209ENST00000600310 SC5DO75845 299 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 IGHV2-5P01817 119 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 MUC1P15941 1255 aaPredicted RBP16.19■□□□□ 0.18
UPF1-209ENST00000600310 FSTP19883 344 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 CPT2P23786 658 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 PSMA1P25786 263 aaKnown RBP16.19■□□□□ 0.18
UPF1-209ENST00000600310 PPP3R1P63098 170 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 INSL4Q14641 139 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 KCNJ8Q15842 424 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 SSX1Q16384 188 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 POC1AQ8NBT0 407 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 TMEM203Q969S6 136 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 ORAI1Q96D31 301 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 RAB39BQ96DA2 213 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 ZNF665Q9H7R5 613 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 PATZ1Q9HBE1 687 aaKnown RBP16.19■□□□□ 0.18
UPF1-209ENST00000600310 TMEM138Q9NPI0 162 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 CKLFQ9UBR5 152 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 FOXJ3Q9UPW0 622 aa16.19■□□□□ 0.18
UPF1-209ENST00000600310 TRAV8-7A0A075B6U6 113 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 A0A087WXM4 84 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 A0A1W2PPK0 400 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 CEACAM18A8MTB9 384 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 TNFRSF13BO14836 293 aaPredicted RBP16.18■□□□□ 0.18
UPF1-209ENST00000600310 INMTO95050 263 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 ALDOBP05062 364 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 HCKP08631 526 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 PGA5P0DJD9 388 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 IGHV4-31P0DP07 118 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 GLRA1P23415 457 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 GABRA5P31644 462 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 TGFBR2P37173 567 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 GZMKP49863 264 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 RPS25P62851 125 aaKnown RBP16.18■□□□□ 0.18
UPF1-209ENST00000600310 CRIP3Q6Q6R5 217 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 DCDC5Q6ZRR9 648 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 BIVMQ86UB2 503 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 TSPAN14Q8NG11 270 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 C12orf43Q96C57 262 aaKnown RBP16.18■□□□□ 0.18
UPF1-209ENST00000600310 SPACA5Q96QH8 159 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 NRIP2Q9BQI9 281 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 WDR13Q9H1Z4 485 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 NOX4Q9NPH5 578 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 RASL12Q9NYN1 266 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 PCDHB10Q9UN67 800 aa16.18■□□□□ 0.18
UPF1-209ENST00000600310 IGHV3OR15-7A0A075B7D8 119 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 F5H0A9 414 aaPredicted RBP16.17■□□□□ 0.18
UPF1-209ENST00000600310 MAGEB3O15480 346 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 NDUFA2O43678 99 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 WNT2P09544 360 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 PSMB9P28065 219 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 BDKRB2P30411 391 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 POU3F4P49335 361 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 KRTAP1-1Q07627 177 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 PDZK1IP1Q13113 114 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 KISS1Q15726 138 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 MICBQ29980 383 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 SYT6Q5T7P8 510 aaPredicted RBP16.17■□□□□ 0.18
UPF1-209ENST00000600310 SLC25A26Q70HW3 274 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 RNF144BQ7Z419 303 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 CEACAM19Q7Z692 300 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 FAM90A1Q86YD7 464 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 OR52N4Q8NGI2 321 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 TMIGD2Q96BF3 282 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 SEH1LQ96EE3 360 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 CPNE2Q96FN4 548 aaPredicted RBP16.17■□□□□ 0.18
UPF1-209ENST00000600310 NR1H4Q96RI1 486 aaPredicted RBP16.17■□□□□ 0.18
UPF1-209ENST00000600310 MIOXQ9UGB7 285 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 CR1P17927 2039 aa16.17■□□□□ 0.18
UPF1-209ENST00000600310 FAM157AC9JC47 383 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 PLATP00750 562 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 ZP1P60852 638 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 GMFBP60983 142 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 ERVK11-1P61568 191 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 CYB5R2Q6BCY4 276 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 TMEM91Q6ZNR0 172 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 MKXQ8IYA7 352 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 PHYHIPQ92561 330 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 RFT1Q96AA3 541 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 ZNF488Q96MN9 340 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 SMR3AQ99954 134 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 HES4Q9HCC6 221 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 NDUFB11Q9NX14 153 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 MTCH1Q9NZJ7 389 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 DNAJB11Q9UBS4 358 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 MTORP42345 2549 aa16.16■□□□□ 0.18
UPF1-209ENST00000600310 CCRL2O00421 344 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 RGS9O75916 674 aaPredicted RBP16.15■□□□□ 0.18
UPF1-209ENST00000600310 LY6G6DO95868 133 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 CYB5AP00167 134 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms