RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 ZNF205O95201 554 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 EGR1P18146 543 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 CD80P33681 288 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 MDH2P40926 338 aaKnown RBP15.23■□□□□ 0.03
LIG1-216ENST00000598938 RBP2P50120 134 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 ATP1B3P54709 279 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 LMO4P61968 165 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 UNQ9370/PRO34162Q6UXP9 181 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 LHFPL2Q6ZUX7 228 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 CALHM1Q8IU99 346 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 FCGR1BQ92637 280 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 THRSPQ92748 146 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 DERL3Q96Q80 235 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 OR14A2Q96R54 314 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 TMED9Q9BVK6 235 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 PKIBQ9C010 78 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 NARFLQ9H6Q4 476 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 ZNF696Q9H7X3 374 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 TMEM165Q9HC07 324 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 CUBNO60494 3623 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.22■□□□□ 0.03
LIG1-216ENST00000598938 LGALS8O00214 317 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 GPX5O75715 221 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 SC5DO75845 299 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 IGFBP3P17936 291 aaPredicted RBP15.22■□□□□ 0.03
LIG1-216ENST00000598938 FSTP19883 344 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 RAB3AP20336 220 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 IL2RGP31785 369 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 IL24Q13007 206 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 TMEM249Q2WGJ8 235 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 ZNF404Q494X3 552 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 ARMCX4Q5H9R4 360 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 TEX36Q5VZQ5 186 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 ANGPTL5Q86XS5 388 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 MUC20Q8N307 709 aaPredicted RBP15.22■□□□□ 0.03
LIG1-216ENST00000598938 BOLLQ8N9W6 283 aaKnown RBP15.22■□□□□ 0.03
LIG1-216ENST00000598938 ZNF671Q8TAW3 534 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 ORAI1Q96D31 301 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 C1orf159Q96HA4 380 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 GAL3ST1Q99999 423 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 NEK6Q9HC98 313 aa15.22■□□□□ 0.03
LIG1-216ENST00000598938 SF3B6Q9Y3B4 125 aaKnown RBP15.22■□□□□ 0.03
LIG1-216ENST00000598938 OOEPA6NGQ2 149 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 AKR7A2O43488 359 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 SYNGR1O43759 233 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 NOS1APO75052 506 aaPredicted RBP15.21■□□□□ 0.03
LIG1-216ENST00000598938 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 ACAA1P09110 424 aaPredicted RBP15.21■□□□□ 0.03
LIG1-216ENST00000598938 OCMP0CE72 109 aaPredicted RBP15.21■□□□□ 0.03
LIG1-216ENST00000598938 MAPK3P27361 379 aaPredicted RBP15.21■□□□□ 0.03
LIG1-216ENST00000598938 MTCP1P56278 107 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 RPS25P62851 125 aaKnown RBP15.21■□□□□ 0.03
LIG1-216ENST00000598938 INSL4Q14641 139 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 TRAM1Q15629 374 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 SSX1Q16384 188 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 CHRFAM7AQ494W8 412 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 ACSM3Q53FZ2 586 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 CRIP3Q6Q6R5 217 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 SPICQ8N5J4 248 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 POC1AQ8NBT0 407 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 C19orf18Q8NEA5 215 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 OR51A2Q8NGJ7 313 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 TMEM246Q9BRR3 403 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 ZNF665Q9H7R5 613 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 POLDIP2Q9Y2S7 368 aa15.21■□□□□ 0.03
LIG1-216ENST00000598938 ANK3Q12955 4377 aaKnown RBP15.2■□□□□ 0.02
LIG1-216ENST00000598938 F5H0A9 414 aaPredicted RBP15.2■□□□□ 0.02
LIG1-216ENST00000598938 C3orf80F5H4A9 247 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 PIN1P1O15428 100 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 ALDOBP05062 364 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 HCKP08631 526 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 PGA5P0DJD9 388 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 PSMA1P25786 263 aaKnown RBP15.2■□□□□ 0.02
LIG1-216ENST00000598938 GABRA5P31644 462 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 PPP3R1P63098 170 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 SFRP4Q6FHJ7 346 aaPredicted RBP15.2■□□□□ 0.02
LIG1-216ENST00000598938 RNF144BQ7Z419 303 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 TSPAN14Q8NG11 270 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 SPACA5Q96QH8 159 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 PATZ1Q9HBE1 687 aaKnown RBP15.2■□□□□ 0.02
LIG1-216ENST00000598938 NOX4Q9NPH5 578 aa15.2■□□□□ 0.02
LIG1-216ENST00000598938 TRAV8-7A0A075B6U6 113 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 A0A087WXM4 84 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 TRAV38-1A0A0B4J264 116 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 A0A1W2PPK0 400 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 CEACAM18A8MTB9 384 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 TNFRSF13BO14836 293 aaPredicted RBP15.19■□□□□ 0.02
LIG1-216ENST00000598938 INMTO95050 263 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 FAM157CP0CG43 387 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 IGHV4-31P0DP07 118 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 MUC1P15941 1255 aaPredicted RBP15.19■□□□□ 0.02
LIG1-216ENST00000598938 PSMB9P28065 219 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 TGFBR2P37173 567 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 KISS1Q15726 138 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 KCNJ8Q15842 424 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 TMEM91Q6ZNR0 172 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 DCDC5Q6ZRR9 648 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 FAM90A1Q86YD7 464 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 DEFB108BQ8NET1 73 aa15.19■□□□□ 0.02
LIG1-216ENST00000598938 TMEM203Q969S6 136 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms