RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 CEACAM21Q3KPI0 293 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 TMEM42Q69YG0 159 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 HIST2H2BDQ6DRA6 164 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 DEGS2Q6QHC5 323 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 Q6ZSR3 168 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 RNF144BQ7Z419 303 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 ZDHHC23Q8IYP9 409 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 ZNF679Q8IYX0 411 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 PNLDC1Q8NA58 520 aaKnown RBP8.58□□□□□ -1.04
LIG1-213ENST00000596672 ZNRF1Q8ND25 227 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 SETD9Q8NE22 299 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 OR14K1Q8NGZ2 314 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 TMEM163Q8TC26 289 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 C12orf43Q96C57 262 aaKnown RBP8.58□□□□□ -1.04
LIG1-213ENST00000596672 RTL8AQ9BWD3 113 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 ACOXLQ9NUZ1 547 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 NUFIP1Q9UHK0 495 aaKnown RBP8.58□□□□□ -1.04
LIG1-213ENST00000596672 MYRFQ9Y2G1 1151 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 IGKV1-27A0A075B6S5 117 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ZNF816-ZNF321PA0A0X1KG74 233 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 TMEM210A6NLX4 147 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 OR2AT4A6NND4 320 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 GPR137BO60478 399 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 TNFAIP8O95379 198 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ECDO95905 644 aaPredicted RBP8.57□□□□□ -1.04
LIG1-213ENST00000596672 GNALP38405 381 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 CXCR4P61073 352 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 DYNC1I2Q13409 638 aaKnown RBP8.57□□□□□ -1.04
LIG1-213ENST00000596672 KCNJ8Q15842 424 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 C6orf141Q5SZD1 244 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 METTL11BQ5VVY1 283 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ZNF322Q6U7Q0 402 aaPredicted RBP8.57□□□□□ -1.04
LIG1-213ENST00000596672 SHISA2Q6UWI4 295 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 MOB3CQ70IA8 216 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 LDLRAD3Q86YD5 345 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 CALHM1Q8IU99 346 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 SLC35F2Q8IXU6 374 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ELMOD2Q8IZ81 293 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 SGMS2Q8NHU3 365 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 CNIH3Q8TBE1 160 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 FAM81AQ8TBF8 368 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 TBX5Q99593 518 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ZNF696Q9H7X3 374 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ZMAT3Q9HA38 289 aaKnown RBP8.57□□□□□ -1.04
LIG1-213ENST00000596672 VCX3AQ9NNX9 186 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 NOX4Q9NPH5 578 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 GPR173Q9NS66 373 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 C19orf12Q9NSK7 152 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ONECUT1Q9UBC0 465 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 NLKQ9UBE8 527 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 ENOPH1Q9UHY7 261 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 PIGLQ9Y2B2 252 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 MMP24Q9Y5R2 645 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 KPTNQ9Y664 436 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 V9GYS6 101 aa8.57□□□□□ -1.04
LIG1-213ENST00000596672 A0A1W2PQL4 384 aaPredicted RBP8.56□□□□□ -1.04
LIG1-213ENST00000596672 PQLC2LA1A4F0 135 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 ACOD1A6NK06 481 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 ANXA2P2A6NMY6 339 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 NDUFB3O43676 98 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 MTRF1O75570 445 aaKnown RBP8.56□□□□□ -1.04
LIG1-213ENST00000596672 NDUFA7O95182 113 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 KIR3DL2P43630 455 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 MAP2K3P46734 347 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 RAG2P55895 527 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 BPIFB3P59826 476 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 ERVK11-1P61568 191 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 GNG3P63215 75 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 IL13RA1P78552 427 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 ZNF85Q03923 595 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 MZT1Q08AG7 82 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 PDCD1Q15116 288 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 LDLRAD2Q5SZI1 272 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 NXNL2Q5VZ03 156 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 LAIR2Q6ISS4 152 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 HAGHLQ6PII5 290 aaPredicted RBP8.56□□□□□ -1.04
LIG1-213ENST00000596672 METAP1DQ6UB28 335 aaPredicted RBP8.56□□□□□ -1.04
LIG1-213ENST00000596672 ACP7Q6ZNF0 438 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 KCTD8Q6ZWB6 473 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 ANGPTL5Q86XS5 388 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 ENTHD1Q8IYW4 607 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 PRSS35Q8N3Z0 413 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 BPIFB6Q8NFQ5 453 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 OR5A2Q8NGI9 324 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 OR51G2Q8NGK0 314 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 RORBQ92753 470 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 SDSLQ96GA7 329 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
LIG1-213ENST00000596672 YTHDF1Q9BYJ9 559 aaKnown RBP8.56□□□□□ -1.04
LIG1-213ENST00000596672 TRIM36Q9NQ86 728 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 IMPAD1Q9NX62 359 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 IKZF2Q9UKS7 526 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 R4GMQ9 66 aa8.56□□□□□ -1.04
LIG1-213ENST00000596672 HSPE1-MOB4S4R3N1 261 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms