RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 FAHD2BQ6P2I3 314 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-204ENST00000596348 RPL22L1Q6P5R6 122 aaKnown RBP12.47□□□□□ -0.41
SCN1B-204ENST00000596348 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 NLRC3Q7RTR2 1065 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 ZNF573Q86YE8 665 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 ZFP41Q8N8Y5 198 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 OR4M2Q8NGB6 313 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 OR5T2Q8NGG2 359 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 DACT3Q96B18 629 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-204ENST00000596348 FAHD2AQ96GK7 314 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 COMMD4Q9H0A8 199 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 TRIM36Q9NQ86 728 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 SNTG1Q9NSN8 517 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 CHCHD3Q9NX63 227 aaKnown RBP12.47□□□□□ -0.41
SCN1B-204ENST00000596348 LPAR3Q9UBY5 353 aa12.47□□□□□ -0.41
SCN1B-204ENST00000596348 COL6A5A8TX70 2615 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 PPIAL4CA0A0B4J2A2 164 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 PTGES3LE9PB15 166 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 NDUFA2O43678 99 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 CDK1P06493 297 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 PGA5P0DJD9 388 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 PCMT1P22061 227 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 GNB2P62879 340 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 MED21Q13503 144 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 DMKNQ6E0U4 476 aaPredicted RBP12.46□□□□□ -0.41
SCN1B-204ENST00000596348 RNF144BQ7Z419 303 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 FGFRL1Q8N441 504 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 FAM216BQ8N7L0 139 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 POC1AQ8NBT0 407 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 ZNF671Q8TAW3 534 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 C12orf43Q96C57 262 aaKnown RBP12.46□□□□□ -0.41
SCN1B-204ENST00000596348 SMIM19Q96E16 107 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 TECTBQ96PL2 329 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 CCL13Q99616 98 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 RASSF4Q9H2L5 321 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 KAAG1Q9UBP8 84 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 DNAJB11Q9UBS4 358 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 CLN8Q9UBY8 286 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 OPN4Q9UHM6 478 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 SLC7A11Q9UPY5 501 aa12.46□□□□□ -0.41
SCN1B-204ENST00000596348 C22orf46C9J442 243 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 SERPINA3P01011 423 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 FAM157CP0CG43 387 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 SELLP14151 372 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 ATF1P18846 271 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 HNF1AP20823 631 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 GLRA1P23415 457 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 AZGP1P25311 298 aaKnown RBP12.45□□□□□ -0.42
SCN1B-204ENST00000596348 FUT6P51993 359 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 SLC35A2P78381 396 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 CNN3Q15417 329 aaKnown RBP12.45□□□□□ -0.42
SCN1B-204ENST00000596348 ASPHD2Q6ICH7 369 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 CRIP3Q6Q6R5 217 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 PARP16Q8N5Y8 322 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 NANOGP1Q8N7R0 232 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 DNAAF1Q8NEP3 725 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 OR13C5Q8NGS8 318 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 OR13C9Q8NGT0 318 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 ANGPTL6Q8NI99 470 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
SCN1B-204ENST00000596348 CNBD2Q96M20 576 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 NRIP2Q9BQI9 281 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 PKIBQ9C010 78 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 NLKQ9UBE8 527 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 OR5V1Q9UGF6 321 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 INSIG2Q9Y5U4 225 aa12.45□□□□□ -0.42
SCN1B-204ENST00000596348 IGKV1D-17A0A075B6S4 117 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 OR2AT4A6NND4 320 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 F8VVB4 439 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 F8VWA3 439 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 J3QLI3 93 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 DVL1O14640 695 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 MYL12BO14950 172 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 NOS1APO75052 506 aaPredicted RBP12.44□□□□□ -0.42
SCN1B-204ENST00000596348 PLATP00750 562 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 SRD5A1P18405 259 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 GATA3P23771 443 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 SOX2P48431 317 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 WNT4P56705 351 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 ERVK11-1P61568 191 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 IL24Q13007 206 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 IRF3Q14653 427 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
SCN1B-204ENST00000596348 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 GHSRQ92847 366 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 TMIGD2Q96BF3 282 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 PGLYRP3Q96LB9 341 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 SPACA5Q96QH8 159 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 CDCA4Q9BXL8 241 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 DUSP21Q9H596 190 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 ZCCHC4Q9H5U6 513 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 C7orf69Q9H7B7 122 aa12.44□□□□□ -0.42
SCN1B-204ENST00000596348 HES4Q9HCC6 221 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms