RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CDC42EP3Q9UKI2 254 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 SIRT4Q9Y6E7 314 aaPredicted RBP21.52■■□□□ 1.04
TRIM28-204ENST00000594806 FAM230AA0A1W2PPH8 454 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.51■■□□□ 1.03
TRIM28-204ENST00000594806 AKR7A2O43488 359 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 RGS10O43665 173 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 RHBDL1O75783 438 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 IL24Q13007 206 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 C11orf91Q3C1V1 193 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 YIF1BQ5BJH7 314 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 LHFPL2Q6ZUX7 228 aa21.51■■□□□ 1.03
TRIM28-204ENST00000594806 TRMT10AQ8TBZ6 339 aaKnown RBP21.51■■□□□ 1.03
TRIM28-204ENST00000594806 PAK1IP1Q9NWT1 392 aaPredicted RBP21.51■■□□□ 1.03
TRIM28-204ENST00000594806 A0A0G2JMP0 313 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 A0A0X1KG70 313 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 CRLF1O75462 422 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 OCM2P0CE71 109 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 OCMP0CE72 109 aaPredicted RBP21.5■■□□□ 1.03
TRIM28-204ENST00000594806 HNF1AP20823 631 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 PITPNBP48739 271 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 RIPPLY3P57055 190 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 GNB2P62879 340 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 IRF3Q14653 427 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 ATPAF1Q5TC12 328 aaPredicted RBP21.5■■□□□ 1.03
TRIM28-204ENST00000594806 PRSS48Q7RTY5 328 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 POC1AQ8NBT0 407 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 OR4M2Q8NGB6 313 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 GHSRQ92847 366 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 TMIGD2Q96BF3 282 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 SHARPINQ9H0F6 387 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 CLN8Q9UBY8 286 aa21.5■■□□□ 1.03
TRIM28-204ENST00000594806 IGKV1-9A0A0C4DH69 117 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 J3QLI3 93 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 ADAM20O43506 726 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 GYPAP02724 150 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 PGA5P0DJD9 388 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 AZGP1P25311 298 aaKnown RBP21.49■■□□□ 1.03
TRIM28-204ENST00000594806 LCN2P80188 198 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 CR1LQ2VPA4 569 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 LYPD2Q6UXB3 125 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 SLC36A1Q7Z2H8 476 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 TEX29Q8N6K0 151 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 NPRL2Q8WTW4 380 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 RGP1Q92546 391 aaPredicted RBP21.49■■□□□ 1.03
TRIM28-204ENST00000594806 OPALINQ96PE5 141 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 NLKQ9UBE8 527 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 OR5V1Q9UGF6 321 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 ARHGAP32A7KAX9 2087 aa21.49■■□□□ 1.03
TRIM28-204ENST00000594806 ZFP36P26651 326 aaKnown RBP21.48■■□□□ 1.03
TRIM28-204ENST00000594806 MTCP1P56278 107 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 SEC61A1P61619 476 aaKnown RBP21.48■■□□□ 1.03
TRIM28-204ENST00000594806 HOXA4Q00056 320 aaPredicted RBP21.48■■□□□ 1.03
TRIM28-204ENST00000594806 SPHARQ15513 63 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 CHRFAM7AQ494W8 412 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 ZNF841Q6ZN19 808 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 CALHM1Q8IU99 346 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 THRSPQ92748 146 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 PGLYRP3Q96LB9 341 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 WDR13Q9H1Z4 485 aa21.48■■□□□ 1.03
TRIM28-204ENST00000594806 IGHV3OR15-7A0A075B7D8 119 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 KIAA1324LA8MWY0 1029 aaPredicted RBP21.47■■□□□ 1.03
TRIM28-204ENST00000594806 SULT1B1O43704 296 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 SYNGR1O43759 233 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 CELP19835 753 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 SMIM21Q3B7S5 101 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 FAM120AOSQ5T036 256 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 DCAF12L2Q5VW00 463 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 WDR25Q64LD2 544 aaPredicted RBP21.47■■□□□ 1.03
TRIM28-204ENST00000594806 STUMQ69YW2 141 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 ANGPTL5Q86XS5 388 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 OR13C9Q8NGT0 318 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 TMEM106AQ96A25 262 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 CPNE2Q96FN4 548 aaPredicted RBP21.47■■□□□ 1.03
TRIM28-204ENST00000594806 NRIP2Q9BQI9 281 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 BEX2Q9BXY8 128 aa21.47■■□□□ 1.03
TRIM28-204ENST00000594806 YTHDF1Q9BYJ9 559 aaKnown RBP21.47■■□□□ 1.03
TRIM28-204ENST00000594806 IGKV1-27A0A075B6S5 117 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 TRBV5-5A0A0J9YX44 114 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 TMPRSS2O15393 492 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 MRPS14O60783 128 aaKnown RBP21.46■■□□□ 1.03
TRIM28-204ENST00000594806 CYB5AP00167 134 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 GPR50Q13585 617 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 Q499Y3 187 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 CD276Q5ZPR3 534 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 ZNF529Q6P280 563 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 ACP7Q6ZNF0 438 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 MKXQ8IYA7 352 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 ZFP41Q8N8Y5 198 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 ANGPTL6Q8NI99 470 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 MED30Q96HR3 178 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 CTSZQ9UBR2 303 aa21.46■■□□□ 1.03
TRIM28-204ENST00000594806 LSM2Q9Y333 95 aaKnown RBP21.46■■□□□ 1.03
TRIM28-204ENST00000594806 NKX6-3A6NJ46 265 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 OR2AT4A6NND4 320 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 GPR37O15354 613 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 PHF1O43189 567 aaPredicted RBP21.45■■□□□ 1.02
TRIM28-204ENST00000594806 RAB3AP20336 220 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 EEF1B2P24534 225 aaKnown RBP21.45■■□□□ 1.02
TRIM28-204ENST00000594806 SOX2P48431 317 aa21.45■■□□□ 1.02
TRIM28-204ENST00000594806 GABARAPL2P60520 117 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms