RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 MED22Q15528 200 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 YIF1BQ5BJH7 314 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 LHFPL2Q6ZUX7 228 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 FAM90A1Q86YD7 464 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 PARP16Q8N5Y8 322 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 TMEM186Q96B77 213 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 SPSB1Q96BD6 273 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 C12orf43Q96C57 262 aaKnown RBP17.81■□□□□ 0.44
ATG4D-212ENST00000590096 OPALINQ96PE5 141 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 PKIBQ9C010 78 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 LRCH1Q9Y2L9 728 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 TRAV20A0A0B4J274 112 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 IGKV1-9A0A0C4DH69 117 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 INAFM1C9JVW0 142 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 PLPP2O43688 288 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 SYNGR1O43759 233 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 PCMT1P22061 227 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 LCN2P80188 198 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 ACSM1Q08AH1 577 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 SPHARQ15513 63 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 ANGPTL5Q86XS5 388 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 TMEM106AQ96A25 262 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 POM121Q96HA1 1249 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 PGLYRP3Q96LB9 341 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 OR5M11Q96RB7 305 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 SSBP3Q9BWW4 388 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-212ENST00000590096 WDR13Q9H1Z4 485 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 HIF1ANQ9NWT6 349 aa17.8■□□□□ 0.44
ATG4D-212ENST00000590096 LSM2Q9Y333 95 aaKnown RBP17.8■□□□□ 0.44
ATG4D-212ENST00000590096 NSD1Q96L73 2696 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-212ENST00000590096 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.79■□□□□ 0.44
ATG4D-212ENST00000590096 ADAM20O43506 726 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 CD1AP06126 327 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 MPZP25189 248 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 PITPNBP48739 271 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 MTCP1P56278 107 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 GABARAPL2P60520 117 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 SEC61A1P61619 476 aaKnown RBP17.79■□□□□ 0.44
ATG4D-212ENST00000590096 GNB2P62879 340 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 LYPD2Q6UXB3 125 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 CALHM1Q8IU99 346 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 TMIGD2Q96BF3 282 aa17.79■□□□□ 0.44
ATG4D-212ENST00000590096 IGKV1-27A0A075B6S5 117 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 SULT1B1O43704 296 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 ALX3O95076 343 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 PLATP00750 562 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 HCKP08631 526 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 PGA5P0DJD9 388 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 RAB3AP20336 220 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 IL24Q13007 206 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 SMIM21Q3B7S5 101 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 Q499Y3 187 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 POC1AQ8NBT0 407 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 OR13C5Q8NGS8 318 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 SEH1LQ96EE3 360 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 SNTG1Q9NSN8 517 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 TMEM160Q9NX00 188 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 RASL12Q9NYN1 266 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 NLKQ9UBE8 527 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 CLN8Q9UBY8 286 aa17.78■□□□□ 0.44
ATG4D-212ENST00000590096 SONP18583 2426 aaKnown RBP17.78■□□□□ 0.44
ATG4D-212ENST00000590096 TRBV5-5A0A0J9YX44 114 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 A8MXK9 166 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 TMPRSS2O15393 492 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 NXPH2O95156 264 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 CYB5AP00167 134 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 ZFP36P26651 326 aaKnown RBP17.77■□□□□ 0.44
ATG4D-212ENST00000590096 POU3F4P49335 361 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 NPY4RP50391 375 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 DOC2BQ14184 412 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 SLC36A1Q7Z2H8 476 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 ZNF488Q96MN9 340 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 YTHDF1Q9BYJ9 559 aaKnown RBP17.77■□□□□ 0.44
ATG4D-212ENST00000590096 OR5V1Q9UGF6 321 aa17.77■□□□□ 0.44
ATG4D-212ENST00000590096 A0A0G2JMP0 313 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 A0A0X1KG70 313 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 NKX6-3A6NJ46 265 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 TNFRSF13BO14836 293 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-212ENST00000590096 MAGEB3O15480 346 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 PHF1O43189 567 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-212ENST00000590096 NOS1APO75052 506 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-212ENST00000590096 HSMCR30P0CW71 290 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 PPP3R1P63098 170 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 CR1LQ2VPA4 569 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 STUMQ69YW2 141 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 SLC25A26Q70HW3 274 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 MKXQ8IYA7 352 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 OR4M2Q8NGB6 313 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 OR5T2Q8NGG2 359 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 THRSPQ92748 146 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 UFD1Q92890 307 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 CPNE2Q96FN4 548 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-212ENST00000590096 CCL13Q99616 98 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 TAS2R4Q9NYW5 299 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 KAAG1Q9UBP8 84 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 CKLFQ9UBR5 152 aa17.76■□□□□ 0.43
ATG4D-212ENST00000590096 DOCK11Q5JSL3 2073 aa17.75■□□□□ 0.43
ATG4D-212ENST00000590096 OR2AT4A6NND4 320 aa17.75■□□□□ 0.43
ATG4D-212ENST00000590096 MRPS14O60783 128 aaKnown RBP17.75■□□□□ 0.43
ATG4D-212ENST00000590096 ACAA1P09110 424 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms