RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 KLHDC1Q8N7A1 406 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OR8J1Q8NGP2 316 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OR10Z1Q8NGY1 313 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OR5R1Q8NH85 324 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 PIFOQ8TCI5 191 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 C12orf43Q96C57 262 aaKnown RBP9.45□□□□□ -0.9
LIG3-207ENST00000586119 INTS14Q96SY0 518 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 MBOAT4Q96T53 435 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OR10A2Q9H208 303 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OR51V1Q9H2C8 321 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 C19orf12Q9NSK7 152 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 FAM118AQ9NWS6 357 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 TVP23BQ9NYZ1 205 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 NLKQ9UBE8 527 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 KLHDC2Q9Y2U9 406 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 LOC100130705A0A1B0GUX0 176 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 ANXA2P2A6NMY6 339 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 OR2AT4A6NND4 320 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 H0YAE9 185 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 M0R1W7 72 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 DLGAP1O14490 977 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 ANGPTL7O43827 346 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 CHST1O43916 411 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 MPZL2O60487 215 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 SELENOFO60613 162 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 CST4P01036 141 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 H2BFMP0C1H6 154 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 GLRA1P23415 457 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 EPHA2P29317 976 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 RAB13P51153 203 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 GPM6AP51674 278 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 IL18R1Q13478 541 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 ZIK1Q3SY52 487 aaPredicted RBP9.44□□□□□ -0.9
LIG3-207ENST00000586119 CEP78Q5JTW2 689 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 SLC35D3Q5M8T2 416 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
LIG3-207ENST00000586119 FAM185AQ8N0U4 392 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 DYNAPQ8N1N2 210 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 DHRSXQ8N5I4 330 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 C11orf42Q8N5U0 333 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 CSNK2A3Q8NEV1 391 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 OR52H1Q8NGJ2 320 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 THEM6Q8WUY1 208 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 CFHR4Q92496 578 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 PPP1R14AQ96A00 147 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 MED30Q96HR3 178 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 DMRTB1Q96MA1 342 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 ZNF488Q96MN9 340 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 RTL8AQ9BWD3 113 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 MEGF9Q9H1U4 602 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 METTL8Q9H825 291 aaKnown RBP9.44□□□□□ -0.9
LIG3-207ENST00000586119 ZNF222Q9UK12 451 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 MPC1Q9Y5U8 109 aa9.44□□□□□ -0.9
LIG3-207ENST00000586119 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 ZNF732B4DXR9 585 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 PRODHO43272 600 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 CD28P10747 220 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 HSPA13P48723 471 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 CEBPDP49716 269 aaPredicted RBP9.43□□□□□ -0.9
LIG3-207ENST00000586119 BMXP51813 675 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 CAV3P56539 151 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 IL5RAQ01344 420 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 PLA1AQ53H76 456 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 SLC25A30Q5SVS4 291 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 MEDAGQ5VYS4 303 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 PLBD1Q6P4A8 553 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 CCBE1Q6UXH8 406 aaPredicted RBP9.43□□□□□ -0.9
LIG3-207ENST00000586119 LHFPL4Q7Z7J7 247 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 CPOQ8IVL8 374 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 CD177Q8N6Q3 437 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 TMEM185AQ8NFB2 350 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 OR4M1Q8NGD0 313 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 OR8B12Q8NGG6 310 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 TMEM163Q8TC26 289 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 NRG4Q8WWG1 115 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 NKX3-1Q99801 234 aaPredicted RBP9.43□□□□□ -0.9
LIG3-207ENST00000586119 APOL4Q9BPW4 351 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 DNTTIP1Q9H147 329 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 OR51I2Q9H344 312 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 IMPAD1Q9NX62 359 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 SF3B6Q9Y3B4 125 aaKnown RBP9.43□□□□□ -0.9
LIG3-207ENST00000586119 GMPPBQ9Y5P6 360 aa9.43□□□□□ -0.9
LIG3-207ENST00000586119 MEX3AA1L020 520 aaKnown RBP9.42□□□□□ -0.9
LIG3-207ENST00000586119 TMEM210A6NLX4 147 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 SNTNA6NMZ2 147 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 PSMD9O00233 223 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 PRKYO43930 277 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 GLCEO94923 617 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 CCL3L1P16619 93 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 COX7A1P24310 79 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 CAPGP40121 348 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 VHLP40337 213 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 SNRPGP62308 76 aaKnown RBP9.42□□□□□ -0.9
LIG3-207ENST00000586119 ADARB1P78563 741 aaKnown RBP9.42□□□□□ -0.9
LIG3-207ENST00000586119 TMED1Q13445 227 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms