RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 OR6M1Q8NGM8 313 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 Q8TCH9 128 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 CCL17Q92583 94 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 NINJ1Q92982 152 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 C12orf43Q96C57 262 aaKnown RBP15.47■□□□□ 0.07
RFFL-211ENST00000584541 CNTD2Q9H8S5 307 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 MYOZ1Q9NP98 299 aaPredicted RBP15.47■□□□□ 0.07
RFFL-211ENST00000584541 RNF7Q9UBF6 113 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 MRPS28Q9Y2Q9 187 aaKnown RBP15.47■□□□□ 0.07
RFFL-211ENST00000584541 CRYBG3Q68DQ2 2970 aa15.47■□□□□ 0.07
RFFL-211ENST00000584541 LRBAP50851 2863 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 SMIM30A4D0T7 59 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 TRAPPC2LH3BP13 241 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 SLC17A2O00624 439 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 SPRY1O43609 319 aaPredicted RBP15.46■□□□□ 0.07
RFFL-211ENST00000584541 CLEC2LP0C7M8 214 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 HTR2CP28335 458 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 RPS19P39019 145 aaKnown RBP15.46■□□□□ 0.07
RFFL-211ENST00000584541 OR3A4PP47883 348 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 PTH2RP49190 550 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 ZP1P60852 638 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 RAB11BQ15907 218 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 C1orf100Q5SVJ3 147 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 AWAT2Q6E213 333 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 WDR82Q6UXN9 313 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 ZNF826PQ6ZT77 177 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 RNF144BQ7Z419 303 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 C11orf53Q8IXP5 236 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 PXT1Q8NFP0 134 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 OR10Z1Q8NGY1 313 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 OR51F2Q8NH61 342 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 NDNFQ8TB73 568 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 LRRC29Q8WV35 223 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
RFFL-211ENST00000584541 GFI1Q99684 422 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 NKX3-1Q99801 234 aaPredicted RBP15.46■□□□□ 0.07
RFFL-211ENST00000584541 GSX2Q9BZM3 304 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 ELL3Q9HB65 397 aaPredicted RBP15.46■□□□□ 0.07
RFFL-211ENST00000584541 SMURF1Q9HCE7 757 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 TREM2Q9NZC2 230 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 ING4Q9UNL4 249 aa15.46■□□□□ 0.07
RFFL-211ENST00000584541 IFITM5A6NNB3 132 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 SYNGR1O43759 233 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 NDUFS7O75251 213 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 RHBDL1O75783 438 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 CD37P11049 281 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 CFHR2P36980 270 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 SPCS2Q15005 226 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 RSU1Q15404 277 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 DEFB113Q30KQ7 82 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 HES5Q5TA89 166 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 CRIP3Q6Q6R5 217 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 LYPD6Q86Y78 171 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 Q8IYB0 196 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 SLAMF9Q96A28 289 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 PERPQ96FX8 193 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 METTL9Q9H1A3 318 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 PCDHB16Q9NRJ7 776 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 TMEM106BQ9NUM4 274 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 GHRLQ9UBU3 117 aa15.45■□□□□ 0.06
RFFL-211ENST00000584541 AIPO00170 330 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 ANGPTL7O43827 346 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 SSX4O60224 188 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 TMEM127O75204 238 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 LY6HO94772 140 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 IGHV4-39P01824 125 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 ACAA1P09110 424 aaPredicted RBP15.44■□□□□ 0.06
RFFL-211ENST00000584541 UBBP0CG47 229 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 COL8A2P25067 703 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 PMELP40967 661 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 CAPZA1P52907 286 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 CAV3P56539 151 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 HNRNPA0Q13151 305 aaKnown RBP15.44■□□□□ 0.06
RFFL-211ENST00000584541 GPR176Q14439 515 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 CARTPTQ16568 116 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 SFXN4Q6P4A7 337 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 GLIPR1L1Q6UWM5 242 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 PEG10Q86TG7 708 aaKnown RBP15.44■□□□□ 0.06
RFFL-211ENST00000584541 POC1AQ8NBT0 407 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 OR4D6Q8NGJ1 314 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 YIPF5Q969M3 257 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 SLC25A46Q96AG3 418 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 MBD6Q96DN6 1003 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 CEP19Q96LK0 163 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 CHODLQ9H9P2 273 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 RHOFQ9HBH0 211 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 STEAP1Q9UHE8 339 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 DAPK2Q9UIK4 370 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 CACNG2Q9Y698 323 aa15.44■□□□□ 0.06
RFFL-211ENST00000584541 A0A0G2JK05 382 aa15.43■□□□□ 0.06
RFFL-211ENST00000584541 A6NHS1 94 aa15.43■□□□□ 0.06
RFFL-211ENST00000584541 CLDN25C9JDP6 229 aa15.43■□□□□ 0.06
RFFL-211ENST00000584541 TMEM178BH3BS89 294 aa15.43■□□□□ 0.06
RFFL-211ENST00000584541 AKR7A2O43488 359 aa15.43■□□□□ 0.06
RFFL-211ENST00000584541 NOS1APO75052 506 aaPredicted RBP15.43■□□□□ 0.06
RFFL-211ENST00000584541 ZNF780AO75290 641 aaPredicted RBP15.43■□□□□ 0.06
RFFL-211ENST00000584541 CYB5R3P00387 301 aaPredicted RBP15.43■□□□□ 0.06
RFFL-211ENST00000584541 CSTBP04080 98 aaKnown RBP15.43■□□□□ 0.06
RFFL-211ENST00000584541 CSF3P09919 207 aa15.43■□□□□ 0.06
RFFL-211ENST00000584541 PGA5P0DJD9 388 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms