RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	AKR1C4	P17516	323 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PI3	P19957	117 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FAU	P35544	74 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ATP1B3	P54709	279 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	INSM1	Q01101	510 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EIF2B1	Q14232	305 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CDNF	Q49AH0	187 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	D2HGDH	Q8N465	521 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ASB5	Q8WWX0	329 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SAT2	Q96F10	170 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC25A44	Q96H78	314 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC6A7	Q99884	636 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ARRDC1-AS1	Q9H2J1	176 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TRBV5-5	A0A0J9YX44	114 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF354A	O60765	605 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	REN	P00797	406 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PAX6	P26367	422 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ACKR1	Q16570	336 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM71	Q6P5X7	295 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMPPE	Q6ZT21	453 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMPRSS7	Q7RTY8	843 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	BPIFB2	Q8N4F0	458 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR56B1	Q8NGI3	324 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF417	Q8TAU3	575 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SEH1L	Q96EE3	360 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MVB12A	Q96EY5	273 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TAAR6	Q96RI8	345 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TUBD1	Q9UJT1	453 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DHDH	Q9UQ10	334 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMED7	Q9Y3B3	224 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LAMA5	O15230	3695 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GVINP1	Q7Z2Y8	2422 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SNRPGP15	A8MWD9	76 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		A8MXK9	166 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		D6RAR5	112 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LOC400499	M0QZD8	3231 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GPR31	O00270	319 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SCRG1	O75711	98 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IFNA21	P01568	189 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IL5	P05113	134 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C4BPB	P20851	252 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CXCR1	P25024	350 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CLDN6	P56747	220 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IL10RA	Q13651	578 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM249	Q2WGJ8	235 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CARD17	Q5XLA6	110 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CLEC1A	Q8NC01	280 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SEMA6D	Q8NFY4	1073 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR5M9	Q8NGP3	310 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR6N1	Q8NGY5	312 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF721	Q8TF20	911 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DAZL	Q92904	295 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF501	Q96CX3	271 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DCBLD2	Q96PD2	775 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MRPL22	Q9NWU5	206 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	COA3	Q9Y2R0	106 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		R4GN57	208 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	URGCP-MRPS24	S4R325	110 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IGHV5-10-1	A0A0J9YXX1	117 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		A0A1B0GX78	115 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR5H14	A6NHG9	310 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		H3BML4	177 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF208	O43345	1280 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CEACAM1	P13688	526 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SERPINA2	P20848	420 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ITGA3	P26006	1051 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SNRPE	P62304	92 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DHRS2	Q13268	280 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SPATA46	Q5T0L3	261 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MYO7B	Q6PIF6	2116 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MRPL21	Q7Z2W9	205 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CCDC54	Q8NEL0	328 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PXT1	Q8NFP0	134 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM56	Q96MV1	263 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OCSTAMP	Q9BR26	566 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EMC6	Q9BV81	110 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OCIAD1	Q9NX40	245 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM56-RWDD3	S4R434	201 aa		10.23	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		A0A087WZY1	265 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	P2RY10	O00398	339 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FGF2	P09038	288 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CSRP1	P21291	193 aa	Known RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NOVA1	P51513	510 aa	Known RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CXADR	P78310	365 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MC2R	Q01718	297 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GUK1	Q16774	197 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM225	Q6GV28	225 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	WDR74	Q6RFH5	385 aa	Predicted RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OTOS	Q8NHW6	89 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GPX8	Q8TED1	209 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PPP1R1C	Q8WVI7	109 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RSRP1	Q9BUV0	290 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	VN1R1	Q9GZP7	353 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ASF1B	Q9NVP2	202 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GFOD1	Q9NXC2	390 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	KLK13	Q9UKR3	277 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms