RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SLC2A1P11166 492 aa8.78□□□□□ -1
SS18-221ENST00000582448 CD79AP11912 226 aa8.78□□□□□ -1
SS18-221ENST00000582448 ATF1P18846 271 aa8.78□□□□□ -1
SS18-221ENST00000582448 ELK1P19419 428 aa8.78□□□□□ -1
SS18-221ENST00000582448 AZGP1P25311 298 aaKnown RBP8.78□□□□□ -1
SS18-221ENST00000582448 OTX1P32242 354 aaPredicted RBP8.78□□□□□ -1
SS18-221ENST00000582448 NR4A2P43354 598 aa8.78□□□□□ -1
SS18-221ENST00000582448 MAGEB1P43366 347 aa8.78□□□□□ -1
SS18-221ENST00000582448 PITPNBP48739 271 aa8.78□□□□□ -1
SS18-221ENST00000582448 PSG4Q00888 419 aa8.78□□□□□ -1
SS18-221ENST00000582448 C9orf135Q5VTT2 229 aa8.78□□□□□ -1
SS18-221ENST00000582448 TMEM200BQ69YZ2 307 aa8.78□□□□□ -1
SS18-221ENST00000582448 PYHIN1Q6K0P9 492 aa8.78□□□□□ -1
SS18-221ENST00000582448 LINGO2Q7L985 606 aa8.78□□□□□ -1
SS18-221ENST00000582448 NR2C2APQ86WQ0 139 aa8.78□□□□□ -1
SS18-221ENST00000582448 JAGN1Q8N5M9 183 aa8.78□□□□□ -1
SS18-221ENST00000582448 OR1M1Q8NGA1 313 aa8.78□□□□□ -1
SS18-221ENST00000582448 OR6M1Q8NGM8 313 aa8.78□□□□□ -1
SS18-221ENST00000582448 OR6K3Q8NGY3 331 aa8.78□□□□□ -1
SS18-221ENST00000582448 SETD6Q8TBK2 473 aa8.78□□□□□ -1
SS18-221ENST00000582448 LGALS14Q8TCE9 139 aa8.78□□□□□ -1
SS18-221ENST00000582448 IGFBPL1Q8WX77 278 aa8.78□□□□□ -1
SS18-221ENST00000582448 RAB40AQ8WXH6 277 aa8.78□□□□□ -1
SS18-221ENST00000582448 C10orf35Q96D05 121 aa8.78□□□□□ -1
SS18-221ENST00000582448 ORAI1Q96D31 301 aa8.78□□□□□ -1
SS18-221ENST00000582448 CPNE2Q96FN4 548 aaPredicted RBP8.78□□□□□ -1
SS18-221ENST00000582448 FAM71F1Q96KD3 344 aaPredicted RBP8.78□□□□□ -1
SS18-221ENST00000582448 SORCS2Q96PQ0 1159 aa8.78□□□□□ -1
SS18-221ENST00000582448 ACTR6Q9GZN1 396 aa8.78□□□□□ -1
SS18-221ENST00000582448 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
SS18-221ENST00000582448 CYSLTR2Q9NS75 346 aa8.78□□□□□ -1
SS18-221ENST00000582448 TAS2R4Q9NYW5 299 aa8.78□□□□□ -1
SS18-221ENST00000582448 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1
SS18-221ENST00000582448 SLC17A2O00624 439 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 XRCC2O43543 280 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 SYNGR3O43761 229 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 NDUFS7O75251 213 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 SOD3P08294 240 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 COX5BP10606 129 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 PPP3CBP16298 524 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 CCL1P22362 96 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 HTR2CP28335 458 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 BDKRB2P30411 391 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 UBE2NP61088 152 aaKnown RBP8.77□□□□□ -1.01
SS18-221ENST00000582448 MALLQ13021 153 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 TSC22D1Q15714 1073 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 PABPC1L2AQ5JQF8 200 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 Q8N402 240 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 POC5Q8NA72 575 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 AKR7LQ8NHP1 331 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 CHPT1Q8WUD6 406 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 PP6455Q8WZ26 134 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 NEUROG1Q92886 237 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 SRRQ9GZT4 340 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 WNT5BQ9H1J7 359 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 SLC17A5Q9NRA2 495 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 PLSCR4Q9NRQ2 329 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 PRSS50Q9UI38 385 aa8.77□□□□□ -1.01
SS18-221ENST00000582448 ROS1P08922 2347 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 ATRQ13535 2644 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 A0A1B0GTI1 187 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 LOC390937A0A1W2PQ73 354 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 CIB4A0PJX0 185 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 DHRS7CA6NNS2 312 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 SULT1B1O43704 296 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 DHRS3O75911 302 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 PTTG1O95997 202 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 PAHP00439 452 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 EIF4EP06730 217 aaKnown RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 MMP7P09237 267 aaPredicted RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 IL7P13232 177 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 ARSBP15848 533 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 ADRA2CP18825 462 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 APLNRP35414 380 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 THBS4P35443 961 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 DDOSTP39656 456 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 RAB1AP62820 205 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 SPOCK1Q08629 439 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 RIN1Q13671 783 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 FAM189A2Q15884 450 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 GSG1Q2KHT4 349 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 LYSMD2Q8IV50 215 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 CDH26Q8IXH8 852 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 PNLDC1Q8NA58 520 aaKnown RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 DNAAF1Q8NEP3 725 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 SEMA6DQ8NFY4 1073 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 OR4M1Q8NGD0 313 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 OR1K1Q8NGR3 316 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 OR1J2Q8NGS2 313 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 OR13C9Q8NGT0 318 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 LILRB1Q8NHL6 650 aaPredicted RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 ITFG2Q969R8 447 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 DIABLOQ9NR28 239 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 C14orf119Q9NWQ9 140 aa8.76□□□□□ -1.01
SS18-221ENST00000582448 SONP18583 2426 aaKnown RBP8.76□□□□□ -1.01
SS18-221ENST00000582448 ZANQ9Y493 2812 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 OVOL3O00110 214 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms