RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 CCNB2O95067 398 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 GASTP01350 101 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 GYPBP06028 91 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SNRNP70P08621 437 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 HSD11B1P28845 292 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CX3CR1P49238 355 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 HMGA2P52926 109 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RPL23AP62750 156 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RPL31P62899 125 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CRMP1Q14194 572 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TEX30Q5JUR7 227 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RASSF6Q6ZTQ3 369 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 KCTD8Q6ZWB6 473 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLC16A9Q7RTY1 509 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR2W3Q7Z3T1 314 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR8D4Q8NGM9 314 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR6K6Q8NGW6 343 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 REEP6Q96HR9 211 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 BTBD10Q9BSF8 475 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TBL2Q9Y4P3 447 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 LYVE1Q9Y5Y7 322 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 IGKV1D-17A0A075B6S4 117 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DHRS12A0PJE2 317 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 MEX3AA1L020 520 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PSMB11A5LHX3 300 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 IFNGP01579 166 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 APOC1P02654 83 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CLUP10909 449 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SPI1P17947 270 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 GLRA1P23415 457 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CFL1P23528 166 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 BLVRAP53004 296 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 FAM3AP98173 230 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 EIF2B1Q14232 305 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 C9orf66Q5T8R8 295 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 C16orf89Q6UX73 402 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 AQP11Q8NBQ7 271 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 KLHL30-AS1Q8NEE0 82 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR2T33Q8NG76 320 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR2T27Q8NH04 317 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR4Q3Q8NH05 313 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SGK3Q96BR1 496 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 P2RX4Q99571 388 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 MICU1Q9BPX6 476 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 USE1Q9NZ43 259 aa10.47□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RIIAD1A6NNX1 92 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SNX3O60493 162 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PSG2P11465 335 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PIPP12273 146 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF3P17036 446 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 AZGP1P25311 298 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DYNLT3P51808 116 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF273Q14593 569 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SNCBQ16143 134 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 GFOD2Q3B7J2 385 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF770Q6IQ21 691 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 FAM57BQ71RH2 274 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OSR2Q8N2R0 312 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CSNK2A3Q8NEV1 391 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR13D1Q8NGV5 346 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR6N2Q8NGY6 317 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ISOC1Q96CN7 298 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PAPOLGQ9BWT3 736 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 NMNAT2Q9BZQ4 307 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TLNRD1Q9H1K6 362 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR10A2Q9H208 303 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ARMC1Q9NVT9 282 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 NDE1Q9NXR1 346 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DNAJC27Q9NZQ0 273 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TAGLN3Q9UI15 199 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF256Q9Y2P7 627 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RHBDD3Q9Y3P4 386 aa10.46□□□□□ -0.73
CDK5RAP3-213ENST00000579605 hCG_38984A0A1B0GV85 526 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 ANXA2P2A6NMY6 339 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 ODF3BA8MYP8 253 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 SEC14L6B5MCN3 397 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 SOX14O95416 240 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 GSTT1P30711 240 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 GSK3AP49840 483 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 GP2P55259 537 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 ZNF121P58317 390 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 PPP1R8Q12972 351 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 SPATS1Q496A3 300 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 CYP2R1Q6VVX0 501 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 ERI1Q8IV48 349 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 DEFB107AQ8IZN7 70 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 FTMTQ8N4E7 242 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 NDNFQ8TB73 568 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 STMN2Q93045 179 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 OTULINQ96BN8 352 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 PGAM5Q96HS1 289 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 RAX2Q96IS3 184 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 AKR1E2Q96JD6 320 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 INTS14Q96SY0 518 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 RTL8AQ9BWD3 113 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 C1orf21Q9H246 121 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 BRD7Q9NPI1 651 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 VNN3Q9NY84 501 aa10.45□□□□□ -0.74
CDK5RAP3-213ENST00000579605 FAM90A22PA8MWA6 464 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms