RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 EIF1P41567 113 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 MC2RQ01718 297 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 KISS1Q15726 138 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 HLA-BQ31612 363 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TMEM200BQ69YZ2 307 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ZNF585AQ6P3V2 769 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SLC25A47Q6Q0C1 308 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 OPN5Q6U736 354 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 C1QL2Q7Z5L3 287 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 WDSUB1Q8N9V3 476 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SLC25A43Q8WUT9 341 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 TMED6Q8WW62 240 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SLC6A15Q9H2J7 730 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ZNF552Q9H707 407 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 MOB1AQ9H8S9 216 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SLC39A1Q9NY26 324 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 PIGLQ9Y2B2 252 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 HDGFL3Q9Y3E1 203 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 MYO7BQ6PIF6 2116 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 A0A0A6YYD4 124 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TEX13DA0A0J9YY54 714 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 A0A1W2PNV4 684 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TXNL1O43396 289 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ANGPTL7O43827 346 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 RAD51DO75771 328 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 LCATP04180 440 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SERPINA5P05154 406 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 PATE4P0C8F1 98 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 CCL3P10147 92 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 CCL4P13236 92 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 GLRA1P23415 457 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 PTGDSP41222 190 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TMEM50BP56557 158 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TAS2R31P59538 309 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ARF1P84077 181 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 YRDCQ86U90 279 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 BATF2Q8N1L9 274 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 GJC3Q8NFK1 279 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 OR2AE1Q8NHA4 323 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 RNF125Q96EQ8 232 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TSNAXQ99598 290 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 EDEM2Q9BV94 578 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SLC25A32Q9H2D1 315 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 OPA3Q9H6K4 179 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 GPR173Q9NS66 373 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 PLEKHJ1Q9NW61 149 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SEMA5BQ9P283 1151 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 RNF222A6NCQ9 220 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 NPIPB13A6NJU9 1138 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 AQP7P3A6NL99 342 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 NPIPB4C9JG80 1138 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 M0R135 149 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 F2RL2O00254 374 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 DUS4LO95620 317 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 HPP00738 406 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 MELTFP08582 738 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 NR2C1P13056 603 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 OTX2P32243 289 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 PTGFRP43088 359 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ZNF84P51523 738 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 MTCP1P56278 107 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 GRB2P62993 217 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 LPAL2Q16609 132 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 AKIRIN2Q53H80 203 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 HSD17B13Q7Z5P4 300 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 TMEM200AQ86VY9 491 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 RPS19BP1Q86WX3 136 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 CCDC36Q8IYA8 594 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 OR1S2Q8NGQ3 325 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TOMM40LQ969M1 308 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 LRRC46Q96FV0 321 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ZNF799Q96GE5 643 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 SCGB3A2Q96PL1 93 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TREM1Q9NP99 234 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 RASL12Q9NYN1 266 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 WNT16Q9UBV4 365 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 ZNF107Q9UII5 783 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 C14orf166Q9Y224 244 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 NOSIPQ9Y314 301 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 NCOA6Q14686 2063 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 MAP1BP46821 2468 aaKnown RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 ARPC4-TTLL3A0A0A6YYG9 625 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 NSG1A0A0A6YYJ2 146 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 A0A0U1RQK1 487 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 ZNF320A2RRD8 509 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 TNFSF11O14788 317 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 TOX3O15405 576 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 CD8AP01732 235 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 CRHP06850 196 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 FGF2P09038 288 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 CNR1P21554 472 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 OPRM1P35372 400 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 RBMXP38159 391 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 QRFPP83859 136 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 RIPPLY1Q0D2K3 151 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 IKZF1Q13422 519 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 FAM189A2Q15884 450 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 TAF9Q16594 264 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 PAN3Q58A45 887 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms