RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FAM157AC9JC47 383 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ISG15P05161 165 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ADH4P08319 380 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 IGHV4-31P0DP07 118 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 MYL9P24844 172 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 PTBP1P26599 531 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC40-215ENST00000576033 CAV3P56539 151 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 PPP3R1P63098 170 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ZMYND11Q15326 602 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF181Q2M3W8 571 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 PCGF3Q3KNV8 242 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 Q499Y3 187 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 FAM209AQ5JX71 171 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 SPANXN2Q5MJ10 180 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 DDI2Q5TDH0 399 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ASPHD2Q6ICH7 369 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 SFXN4Q6P4A7 337 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 METAP1DQ6UB28 335 aaPredicted RBP6.65□□□□□ -1.34
CCDC40-215ENST00000576033 UNQ6126/PRO20091Q6UXV3 157 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 IL17RELQ6ZVW7 336 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 LYSMD2Q8IV50 215 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 C11orf53Q8IXP5 236 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 OR52H1Q8NGJ2 320 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 OR13G1Q8NGZ3 307 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 OR5AK2Q8NH90 309 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 CLDND2Q8NHS1 167 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 TRMT10AQ8TBZ6 339 aaKnown RBP6.65□□□□□ -1.34
CCDC40-215ENST00000576033 PIGCQ92535 297 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 THRSPQ92748 146 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ITPKCQ96DU7 683 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 C18orf12Q96KH6 178 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF488Q96MN9 340 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 OR14A2Q96R54 314 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 GFI1Q99684 422 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 SRRQ9GZT4 340 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 CHODLQ9H9P2 273 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ABCB9Q9NP78 766 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 TMEM106BQ9NUM4 274 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 TMEM100Q9NV29 134 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 NKIRAS2Q9NYR9 191 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 V9GYS6 101 aa6.65□□□□□ -1.34
CCDC40-215ENST00000576033 ABCA1O95477 2261 aa6.65□□□□□ -1.35
CCDC40-215ENST00000576033 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 IGKV1-27A0A075B6S5 117 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 LOC390937A0A1W2PQ73 354 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ANKRD30BLA7E2S9 258 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 FCN3O75636 299 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 RHBDL1O75783 438 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 DHRS3O75911 302 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 IGHV2-70P01814 119 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ERCC1P07992 297 aaPredicted RBP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 FSTP19883 344 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 RAB3BP20337 219 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ACHEP22303 614 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 CCL1P22362 96 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 GIFP27352 417 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 MAPK3P27361 379 aaPredicted RBP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 CD200P41217 278 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 GPR6P46095 362 aaPredicted RBP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 GPM6AP51674 278 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 OR10A3P58181 314 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ZNF154Q13106 437 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 TMEM249Q2WGJ8 235 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 HSD17B12Q53GQ0 312 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 PLCXD3Q63HM9 321 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 SFRP4Q6FHJ7 346 aaPredicted RBP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 C16orf87Q6PH81 154 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 DCDC5Q6ZRR9 648 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 MOB3CQ70IA8 216 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 LRRTM1Q86UE6 522 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 MINDY2Q8NBR6 621 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 OR5P3Q8WZ94 311 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ADAT3Q96EY9 351 aaPredicted RBP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 CMTM3Q96MX0 182 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 MOB1AQ9H8S9 216 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 NOX4Q9NPH5 578 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 CYSLTR2Q9NS75 346 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 C1orf123Q9NWV4 160 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 MRPL15Q9P015 296 aaKnown RBP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ABRACLQ9P1F3 81 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 IL19Q9UHD0 177 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ZDHHC8Q9ULC8 765 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 PPP1R3CQ9UQK1 317 aa6.64□□□□□ -1.35
CCDC40-215ENST00000576033 NIPBLQ6KC79 2804 aaeCLIP6.64□□□□□ -1.35
CCDC40-215ENST00000576033 ZNF816-ZNF321PA0A0X1KG74 233 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 A0A1B0GVI7 797 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SMIM30A4D0T7 59 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 ACOD1A6NK06 481 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 A6NLC8 198 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 TMEM178BH3BS89 294 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SYT7O43581 403 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 PLATP00750 562 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 HLA-DQB1P01920 261 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 APOC1P02654 83 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SELLP14151 372 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 SLC25A16P16260 332 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 IGFBP3P17936 291 aaPredicted RBP6.63□□□□□ -1.35
CCDC40-215ENST00000576033 ADRA2CP18825 462 aa6.63□□□□□ -1.35
CCDC40-215ENST00000576033 ATF1P18846 271 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms