RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 SLC38A10Q9HBR0 1119 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 TMEM165Q9HC07 324 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 ZNF160Q9HCG1 818 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 MRPS30Q9NP92 439 aaKnown RBP1.36□□□□□ -2.19
CDC27-218ENST00000575830 TMEM9BQ9NQ34 198 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 PSMC3IPQ9P2W1 217 aaPredicted RBP1.36□□□□□ -2.19
CDC27-218ENST00000575830 PSME2Q9UL46 239 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 SIGLEC7Q9Y286 467 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 ASCC3Q8N3C0 2202 aaKnown RBP1.36□□□□□ -2.19
CDC27-218ENST00000575830 ANK3Q12955 4377 aaKnown RBP1.36□□□□□ -2.19
CDC27-218ENST00000575830 PTPRSQ13332 1948 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 ELP1O95163 1332 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 MYO3BQ8WXR4 1341 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 TENM2Q9NT68 2774 aa1.36□□□□□ -2.19
CDC27-218ENST00000575830 COL11A1P12107 1806 aaPredicted RBP1.36□□□□□ -2.19
CDC27-218ENST00000575830 SPAG17Q6Q759 2223 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 KCNE1BA0A087WTH5 132 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 TRAV25A0A0B4J276 109 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 OR6C74A6NCV1 312 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 L7N2F9 121 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CLOCKO15516 846 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 LHBP01229 141 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 IGKV1D-16P01601 117 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 HLA-DQB1P01920 261 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 SERPINE2P07093 398 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CT45A6P0DMU7 189 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CT45A5P0DMU8 189 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CT45A7P0DMV0 189 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 TROVE2P10155 538 aaKnown RBP eCLIP1.35□□□□□ -2.19
CDC27-218ENST00000575830 DCKP27707 260 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 TNNT2P45379 298 aaPredicted RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 RPS5P46782 204 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 OR1G1P47890 313 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CSNK1EP49674 416 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 TMED10P49755 219 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 P2RX1P51575 399 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CLDN8P56748 225 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 VSX2P58304 361 aaPredicted RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 CDK5Q00535 292 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 IRF8Q02556 426 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 ILKQ13418 452 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 PIGHQ14442 188 aaPredicted RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 ITIH4Q14624 930 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 RCN1Q15293 331 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 PGGHGQ32M88 737 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CT45A1Q5HYN5 189 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 SPIN3Q5JUX0 258 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 TMCO2Q7Z6W1 182 aaPredicted RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 LRRC52Q8N7C0 313 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 DEFB124Q8NES8 71 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CCDC148Q8NFR7 591 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CT45A3Q8NHU0 189 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 AGR3Q8TD06 166 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 PEX13Q92968 403 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 TCEAL3Q969E4 200 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 ZNF707Q96C28 371 aaPredicted RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 TVP23CQ96ET8 276 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 DNAJC1Q96KC8 554 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 COL21A1Q96P44 957 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 IP6K3Q96PC2 410 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 HSD17B10Q99714 261 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 C11orf70Q9BRQ4 267 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 GGTLC1Q9BX51 225 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 PEF1Q9UBV8 284 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 TBC1D24Q9ULP9 559 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 CHTOPQ9Y3Y2 248 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 PATJQ8NI35 1801 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 KIAA1671Q9BY89 1806 aa1.35□□□□□ -2.19
CDC27-218ENST00000575830 DYNC2H1Q8NCM8 4307 aaKnown RBP1.35□□□□□ -2.19
CDC27-218ENST00000575830 IBTKQ9P2D0 1353 aaPredicted RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 TET1Q8NFU7 2136 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 MUC22E2RYF6 1773 aaPredicted RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 COL7A1Q02388 2944 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 A0A0J9YXV3 536 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 A0A1B0GTQ1 180 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 SPAARA0A1B0GVQ0 90 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 NCF1BA6NI72 391 aaPredicted RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 ZNF98A6NK75 572 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 NCF1CA8MVU1 366 aaPredicted RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 C5orf67F2Z3F1 127 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 SMKR1H3BMG3 65 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 CASQ2O14958 399 aaPredicted RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 RAB29O14966 203 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 PPP1R2P9O14990 202 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 EIF3HO15372 352 aaKnown RBP eCLIP1.34□□□□□ -2.19
CDC27-218ENST00000575830 EIF4E2O60573 245 aaKnown RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 OR2J3O76001 311 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 IGHV3-11P01762 117 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 TACSTD2P09758 323 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 ERGP11308 486 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 TUBG1P23258 451 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 CHMLP26374 656 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 STOMP27105 288 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 CLDN18P56856 261 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 C21orf59P57076 290 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 RAB10P61026 200 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 PPP1CBP62140 327 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 DEFB103AP81534 67 aa1.34□□□□□ -2.19
CDC27-218ENST00000575830 FLI1Q01543 452 aaPredicted RBP1.34□□□□□ -2.19
CDC27-218ENST00000575830 FUT5Q11128 374 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms