RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PLATP00750 562 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 PRTN3P24158 256 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 COMPP49747 757 aaPredicted RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 GPM6AP51674 278 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 BPIFB3P59826 476 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 GMFBP60983 142 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 ARF6P62330 175 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 UBA52P62987 128 aaKnown RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 CEACAM21Q3KPI0 293 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 CEP78Q5JTW2 689 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 ATPAF1Q5TC12 328 aaPredicted RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 GPR157Q5UAW9 335 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 C9orf139Q6ZV77 190 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 MOB3CQ70IA8 216 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 BTN2A1Q7KYR7 527 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 SLC36A1Q7Z2H8 476 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 COMMD2Q86X83 199 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 C10orf67Q8IYJ2 551 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 OR5T2Q8NGG2 359 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 OR5A2Q8NGI9 324 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 OR51G2Q8NGK0 314 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 OR8J1Q8NGP2 316 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 ZNF671Q8TAW3 534 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 PYDC1Q8WXC3 89 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 C12orf43Q96C57 262 aaKnown RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 SEH1LQ96EE3 360 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 FAM71F1Q96KD3 344 aaPredicted RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 ZNF48Q96MX3 618 aaPredicted RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 WDFY2Q96P53 400 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 RBM4BQ9BQ04 359 aaKnown RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 PCGF1Q9BSM1 259 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 RIBC2Q9H4K1 309 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 CNTD2Q9H8S5 307 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 GPR84Q9NQS5 396 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 DNAJB11Q9UBS4 358 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 WARS2Q9UGM6 360 aaKnown RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 NUFIP1Q9UHK0 495 aaKnown RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 GTF2A1LQ9UNN4 478 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 SOX21Q9Y651 276 aaPredicted RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 TRAV40A0A0B4J280 105 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 P2RY10O00398 339 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 SRSF10O75494 262 aaKnown RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 FCN3O75636 299 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 DHRS3O75911 302 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 NRASP01111 189 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 IGLV3-1P01715 115 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 TTRP02766 147 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 KRT8P05787 483 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 SFTPBP07988 381 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 OR2T7P0C7T2 308 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 GLRA1P23415 457 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 HTR1FP30939 366 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 ATP6V1E1P36543 226 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 TGM4P49221 684 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 CDC42P60953 191 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 GNG3P63215 75 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 ELF3P78545 371 aaPredicted RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 MFGE8Q08431 387 aaPredicted RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 TMED1Q13445 227 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 LRRC10Q5BKY1 277 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 DMRTC1Q5HYR2 192 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 WDR38Q5JTN6 314 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 BCL2L15Q5TBC7 163 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 METTL11BQ5VVY1 283 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 BRD3OSQ6XYD6 125 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 ELMOD2Q8IZ81 293 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 C3orf56Q8N813 242 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 YIPF7Q8N8F6 280 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 DTX3Q8N9I9 347 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 OR14K1Q8NGZ2 314 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 OR2T27Q8NH04 317 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 TRUB1Q8WWH5 349 aaKnown RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 HPSE2Q8WWQ2 592 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 ST8SIA4Q92187 359 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 RFKQ969G6 155 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 EME1Q96AY2 570 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 MED30Q96HR3 178 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 DUX5Q96PT3 197 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 RAB3IPQ96QF0 476 aaPredicted RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 TBX15Q96SF7 602 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 TBX5Q99593 518 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 GABARAPL3Q9BY60 117 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 FGF23Q9GZV9 251 aaPredicted RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 DNTTIP1Q9H147 329 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 WDR13Q9H1Z4 485 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 OR51I2Q9H344 312 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 SNTG1Q9NSN8 517 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 MRM2Q9UI43 246 aaKnown RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 ENPP5Q9UJA9 477 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 RPUSD1Q9UJJ7 312 aaKnown RBP6.14□□□□□ -1.43
NUP88-205ENST00000572809 OR52A1Q9UKL2 312 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 PIGLQ9Y2B2 252 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 ORC6Q9Y5N6 252 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 SNX5Q9Y5X3 404 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 R4GMQ9 66 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 V9GYS6 101 aa6.14□□□□□ -1.43
NUP88-205ENST00000572809 CENPVL3A0A0U1RRI6 287 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 A0A1B0GTI1 187 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 A0A1B0GW55 424 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms