RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 FBXW5Q969U6 566 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 SCGB3A2Q96PL1 93 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 CDH20Q9HBT6 801 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF175Q9Y473 711 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 TIMM10BQ9Y5J6 103 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 TRAPPC2LH3BP13 241 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 F12P00748 615 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-206ENST00000571995 CHRM2P08172 466 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 CD46P15529 392 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 PRKACAP17612 351 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 FOXG1P55316 489 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-206ENST00000571995 PLAC9Q5JTB6 97 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 SLC51BQ86UW2 128 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 MKXQ8IYA7 352 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 DTWD2Q8NBA8 298 aa14.2□□□□□ -0.14
RAB40B-206ENST00000571995 TOR1AO14656 332 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 TOX3O15405 576 aaPredicted RBP14.19□□□□□ -0.14
RAB40B-206ENST00000571995 KLF7O75840 302 aaPredicted RBP14.19□□□□□ -0.14
RAB40B-206ENST00000571995 PSMB6P28072 239 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 RAB32Q13637 225 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 CNN3Q15417 329 aaKnown RBP14.19□□□□□ -0.14
RAB40B-206ENST00000571995 PXT1Q8NFP0 134 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 RABL2AQ9UBK7 228 aaPredicted RBP14.19□□□□□ -0.14
RAB40B-206ENST00000571995 RABL2BQ9UNT1 228 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 SLC10A1Q14973 349 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 C1QTNF12Q5T7M4 302 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 SCARB1Q8WTV0 552 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 TRIB1Q96RU8 372 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 EIF5A2Q9GZV4 153 aaKnown RBP14.19□□□□□ -0.14
RAB40B-206ENST00000571995 SLC7A10Q9NS82 523 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 LOC102725191A0A1B0GVB3 256 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 M0R296 226 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 SIRPB1O00241 398 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 SSX5O60225 188 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 DHRS3O75911 302 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF260Q3ZCT1 412 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 CLDN23Q96B33 292 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 TGIF2Q9GZN2 237 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 SLCO5A1Q9H2Y9 848 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 GPR160Q9UJ42 338 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 RNF150Q9ULK6 438 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 FAM96BQ9Y3D0 163 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 NBEAQ8NFP9 2946 aa14.19□□□□□ -0.14
RAB40B-206ENST00000571995 CLN3Q13286 438 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF169Q14929 603 aaPredicted RBP14.18□□□□□ -0.14
RAB40B-206ENST00000571995 TUSC1Q2TAM9 212 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 FAM209AQ5JX71 171 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF732B4DXR9 585 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 NKX2-8O15522 239 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ZIC3O60481 467 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 MED6O75586 246 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF728P0DKX0 622 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 RAB6AP20340 208 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 CA6P23280 308 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 RAG2P55895 527 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 PIGPP57054 158 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 MLF1P58340 268 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 DEGS2Q6QHC5 323 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 PAQR4Q8N4S7 273 aaPredicted RBP14.18□□□□□ -0.14
RAB40B-206ENST00000571995 TAAR9Q96RI9 348 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 C20orf24Q9BUV8 137 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 FAM208BQ5VWN6 2430 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ADAMTS9Q9P2N4 1935 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ANKRD30BLA7E2S9 258 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 NOVA1P51513 510 aaKnown RBP14.18□□□□□ -0.14
RAB40B-206ENST00000571995 RAC3P60763 192 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 C11orf87Q6NUJ2 197 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 CLEC18BQ6UXF7 455 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 DENND4AQ7Z401 1863 aa14.18□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF92Q03936 586 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 EDDM3AQ14507 147 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 SKA3Q8IX90 412 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 DEPPQ9NTK1 212 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 A0A1B0GTI1 187 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 PINLYPA6NC86 204 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 GABRA1P14867 456 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 PRKACBP22694 351 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 MEOX1P50221 254 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 ECH1Q13011 328 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 PPP1R32Q7Z5V6 425 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 ZNF695Q8IW36 515 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 PSMF1Q92530 271 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 SGK3Q96BR1 496 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 WDR13Q9H1Z4 485 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 SAV1Q9H4B6 383 aaPredicted RBP14.17□□□□□ -0.14
RAB40B-206ENST00000571995 TMEM9BQ9NQ34 198 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 NPDC1Q9NQX5 325 aaPredicted RBP14.17□□□□□ -0.14
RAB40B-206ENST00000571995 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 PLSCR5A0PG75 271 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 NGFP01138 241 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 HPNP05981 417 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 ACKR3P25106 362 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 PSG4Q00888 419 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 SLC25A47Q6Q0C1 308 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 MYPOPQ86VE0 399 aaPredicted RBP14.17□□□□□ -0.14
RAB40B-206ENST00000571995 CMTM3Q96MX0 182 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 TREM2Q9NZC2 230 aa14.17□□□□□ -0.14
RAB40B-206ENST00000571995 IGKV1-9A0A0C4DH69 117 aa14.16□□□□□ -0.14
RAB40B-206ENST00000571995 CARFQ8N187 725 aa14.16□□□□□ -0.14
RAB40B-206ENST00000571995 HINT2Q9BX68 163 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms