RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CAV3P56539 151 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 RPL15P61313 204 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 RCN1Q15293 331 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 CEACAM21Q3KPI0 293 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 HAGHLQ6PII5 290 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 C17orf107Q6ZR85 190 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 SLC35F2Q8IXU6 374 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF679Q8IYX0 411 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 BATF2Q8N1L9 274 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 CBR4Q8N4T8 237 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 C11orf42Q8N5U0 333 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 FAM81AQ8TBF8 368 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 RFKQ969G6 155 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 DMRTB1Q96MA1 342 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 APOL4Q9BPW4 351 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 ADGRL4Q9HBW9 690 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 WARS2Q9UGM6 360 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 NUFIP1Q9UHK0 495 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 ACOD1A6NK06 481 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 E9PQ18 207 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF670-ZNF695F2Z2N8 137 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 GPR37O15354 613 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 MTRF1O75570 445 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 NDUFB7P17568 137 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 GLRA1P23415 457 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 HTR1FP30939 366 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 MAP2K3P46734 347 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 GABRA2P47869 451 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 RIDAP52758 137 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 GNG3P63215 75 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 OCLNQ16625 522 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF829Q3KNS6 432 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 MIDNQ504T8 468 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 MOB3CQ70IA8 216 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 SSX6Q7RTT6 188 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 OR51G2Q8NGK0 314 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 PPP1R35Q8TAP8 253 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 TRUB1Q8WWH5 349 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 RORBQ92753 470 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 SDSLQ96GA7 329 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 ABCB9Q9NP78 766 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 CLN6Q9NWW5 311 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 IKZF2Q9UKS7 526 aa11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-211ENST00000569653 MEIOCA2RUB1 952 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 A6NIN4 97 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 M0R1W7 72 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 FBP1P09467 338 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 UBE2E1P51965 193 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 CXCR4P61073 352 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 EGR3Q06889 387 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 TMED1Q13445 227 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF322Q6U7Q0 402 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 ACP7Q6ZNF0 438 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 C1orf122Q6ZSJ8 110 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 CMTM4Q8IZR5 234 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 TMEM185AQ8NFB2 350 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 EME1Q96AY2 570 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 MED30Q96HR3 178 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 HRASLS5Q96KN8 279 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 MBOAT4Q96T53 435 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 C16orf95Q9H693 158 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 MOB1AQ9H8S9 216 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 GPR173Q9NS66 373 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 PIGLQ9Y2B2 252 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
GTF3C1-211ENST00000569653 A0A1W2PQ09 198 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 OR5B21A6NL26 309 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 RFPL4AA6NLU0 287 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 RFPL4AL1F8VTS6 287 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 DLGAP1O14490 977 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 TSPAN9O75954 239 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 PGA5P0DJD9 388 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 ATP6V1E1P36543 226 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 GUCA2AQ02747 115 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 RIPPLY1Q0D2K3 151 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 ZIK1Q3SY52 487 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 PLCXD3Q63HM9 321 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 LPCAT4Q643R3 524 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 DHRS7BQ6IAN0 325 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 Q6ZSR3 168 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 THAP5Q7Z6K1 395 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 COMMD2Q86X83 199 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 MKXQ8IYA7 352 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 POC1AQ8NBT0 407 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 OR5A2Q8NGI9 324 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 OR14K1Q8NGZ2 314 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 NPRL2Q8WTW4 380 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 ITFG2Q969R8 447 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms