RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZNF788Q6ZQV5 615 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 BTN2A1Q7KYR7 527 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 C8orf59Q8N0T1 100 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 ZNF676Q8N7Q3 588 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 PNLDC1Q8NA58 520 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 POC1AQ8NBT0 407 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 ANGPTL6Q8NI99 470 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 TRMT10AQ8TBZ6 339 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 ST8SIA4Q92187 359 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 MED30Q96HR3 178 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 PKIBQ9C010 78 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 A0A1B0GW55 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 FAM230AA0A1W2PPH8 454 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 SYNGR1O43759 233 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 NOS1APO75052 506 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 ACAA1P09110 424 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 PGA5P0DJD9 388 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 PSG2P11465 335 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 MPZP25189 248 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 GABRA2P47869 451 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 IL24Q13007 206 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 CNN3Q15417 329 aaKnown RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 LRRC10Q5BKY1 277 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 TMPRSS11AQ6ZMR5 421 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 ACP7Q6ZNF0 438 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 UPRTQ96BW1 309 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 FGGYQ96C11 551 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 ADAT3Q96EY9 351 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 CAB39Q9Y376 341 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 EXOSC1Q9Y3B2 195 aaKnown RBP11.45□□□□□ -0.58
HERPUD1-218ENST00000569569 TMEM212A6NML5 194 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 ZNF879B4DU55 563 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 E9PI62 339 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 SIGLEC5O15389 551 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 GNAO1P09471 354 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 ZNF20P17024 532 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 MYL12AP19105 171 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 ETV1P50549 477 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 FGF12P61328 243 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 IL13RA1P78552 427 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 IKZF1Q13422 519 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 MED21Q13503 144 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 SMIM21Q3B7S5 101 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 KLF17Q5JT82 389 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 USP43Q70EL4 1123 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 UTS2BQ765I0 119 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 ANGPTL5Q86XS5 388 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 BPIFB2Q8N4F0 458 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 DNAAF1Q8NEP3 725 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 OR51A4Q8NGJ6 313 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 OR13C3Q8NGS6 347 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 OR10AC1Q8NH08 325 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 OR5AK2Q8NH90 309 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 NPRL2Q8WTW4 380 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 TFAP2CQ92754 450 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 GGHQ92820 318 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 TMEM80Q96HE8 168 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 DMRTB1Q96MA1 342 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 GAFA1Q96PS6 74 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 SUCNR1Q9BXA5 334 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 COMMD4Q9H0A8 199 aa11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 CHCHD3Q9NX63 227 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 RPUSD1Q9UJJ7 312 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 DIMT1Q9UNQ2 313 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-218ENST00000569569 IGKV1D-17A0A075B6S4 117 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 IGKV1-27A0A075B6S5 117 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 TRBV2A0A0J9YWF9 115 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 RFPL4AA6NLU0 287 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 RFPL4AL1F8VTS6 287 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 H0YJX3 145 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 NXPH2O95156 264 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 ZFPL1O95159 310 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 ATF1P18846 271 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 PRKACBP22694 351 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 RBP2P50120 134 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 GTF2A1P52655 376 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 ATP1B3P54709 279 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 SRSF2Q01130 221 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 DGUOKQ16854 277 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 CCDC58Q4VC31 144 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 RPL22L1Q6P5R6 122 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 FGFRL1Q8N441 504 aa11.43□□□□□ -0.58
HERPUD1-218ENST00000569569 FBLIM1Q8WUP2 373 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms