RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 CX3CR1P49238 355 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 SMIM21Q3B7S5 101 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 NANOGP8Q6NSW7 305 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 ACP7Q6ZNF0 438 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 DCXRQ7Z4W1 244 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 ZNF429Q86V71 674 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 TIGD4Q8IY51 512 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 ZNF676Q8N7Q3 588 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG1-213ENST00000567737 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
SMG1-213ENST00000567737 HIST1H2AAQ96QV6 131 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 CLEC7AQ9BXN2 247 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 RASL12Q9NYN1 266 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 MOB4Q9Y3A3 225 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 HSPE1-MOB4S4R3N1 261 aa10.8□□□□□ -0.68
SMG1-213ENST00000567737 TRIM64CA6NLI5 447 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 ZNF878C9JN71 531 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 PRR23D1E9PI22 279 aaPredicted RBP10.79□□□□□ -0.68
SMG1-213ENST00000567737 FAM229AH3BQW9 127 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 J3KTA2 159 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 LY6G6CO95867 125 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 PRR23D2P0DMB1 279 aaPredicted RBP10.79□□□□□ -0.68
SMG1-213ENST00000567737 GP9P14770 177 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 GZMMP51124 257 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 GPM6AP51674 278 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 EIF2B1Q14232 305 aaKnown RBP10.79□□□□□ -0.68
SMG1-213ENST00000567737 LRRC23Q53EV4 343 aaPredicted RBP10.79□□□□□ -0.68
SMG1-213ENST00000567737 KLHL12Q53G59 568 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 EPGNQ6UW88 154 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 FOXRED2Q8IWF2 684 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 ZDHHC23Q8IYP9 409 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 DRAM1Q8N682 238 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 ANKRD42Q8N9B4 389 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 OR4P4Q8NGL7 312 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 OR4K13Q8NH42 304 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 HPSE2Q8WWQ2 592 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 PIGCQ92535 297 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 SLAMF6Q96DU3 332 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 RSRC1Q96IZ7 334 aaKnown RBP10.79□□□□□ -0.68
SMG1-213ENST00000567737 ZNF714Q96N38 554 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 FGF23Q9GZV9 251 aaPredicted RBP10.79□□□□□ -0.68
SMG1-213ENST00000567737 FN3KQ9H479 309 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 SESN1Q9Y6P5 492 aa10.79□□□□□ -0.68
SMG1-213ENST00000567737 ANGPT2O15123 496 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 EIF4EBP3O60516 100 aaPredicted RBP10.78□□□□□ -0.68
SMG1-213ENST00000567737 CST4P01036 141 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 SPNP16150 400 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 SLC15A1P46059 708 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 CDX1P47902 265 aaPredicted RBP10.78□□□□□ -0.68
SMG1-213ENST00000567737 EDDM3BP56851 147 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 FXYD6P3P58550 94 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 CBX1P83916 185 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 KRT71Q3SY84 523 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 CXorf66Q5JRM2 361 aaPredicted RBP10.78□□□□□ -0.68
SMG1-213ENST00000567737 FAM57BQ71RH2 274 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 TMEM120AQ9BXJ8 343 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 OR10A2Q9H208 303 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 OR51I2Q9H344 312 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 ISYNA1Q9NPH2 558 aa10.78□□□□□ -0.68
SMG1-213ENST00000567737 OR6C68A6NDL8 312 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 CCRL2O00421 344 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 FFAR1O14842 300 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 HIST1H1CP16403 213 aaKnown RBP10.77□□□□□ -0.69
SMG1-213ENST00000567737 HSD11B1P28845 292 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 GRB2P62993 217 aaKnown RBP10.77□□□□□ -0.69
SMG1-213ENST00000567737 GNG3P63215 75 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 KRT72Q14CN4 511 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 SRSF7Q16629 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMG1-213ENST00000567737 SMARCD3Q6STE5 483 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 SLC35E3Q7Z769 313 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 STPG2Q8N412 459 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 TMEM133Q9H2Q1 129 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 HHLA2Q9UM44 414 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
SMG1-213ENST00000567737 KIAA1109Q2LD37 5005 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 SORL1Q92673 2214 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 TVP23AA6NH52 213 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 LEUTXA8MZ59 168 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 ZNF732B4DXR9 585 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 APOC1P02654 83 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 SPARCP09486 303 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 FAM106CPP0CH98 169 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 IGHV4-30-4P0DP06 118 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 POU3F4P49335 361 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 SELENOWP63302 87 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 FHL3Q13643 280 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 PNLIPRP3Q17RR3 467 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 ERICH5Q6P6B1 374 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 GDPD3Q7L5L3 318 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 ASCC1Q8N9N2 400 aaKnown RBP10.76□□□□□ -0.69
SMG1-213ENST00000567737 PROKR2Q8NFJ6 384 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 ZNF596Q8TC21 504 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 AQP3Q92482 292 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 OR8B4Q96RC9 309 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 TMEM109Q9BVC6 243 aa10.76□□□□□ -0.69
SMG1-213ENST00000567737 RGCCQ9H4X1 137 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms