RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TMEM187Q14656 261 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 KISS1Q15726 138 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 GALNT14Q96FL9 552 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 SOHLH2Q9NX45 425 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 PADI1Q9ULC6 663 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 ZDHHC8Q9ULC8 765 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 DHRS7CA6NNS2 312 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 H3BMH7 237 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 C1QL1O75973 258 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 SEMA4FO95754 770 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 SLC25A47Q6Q0C1 308 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 TTLL10Q6ZVT0 673 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 DDIT4LQ96D03 193 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 PFDN5Q99471 154 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 SH3BGRL3Q9H299 93 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 UCK1Q9HA47 277 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 PARPBPQ9NWS1 579 aa13.74□□□□□ -0.21
COMMD4-215ENST00000566843 MCTS1Q9ULC4 181 aaKnown RBP13.74□□□□□ -0.21
COMMD4-215ENST00000566843 ATXN7L1Q9ULK2 861 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-215ENST00000566843 THADAQ6YHU6 1953 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 IGLV3-1P01715 115 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 PRH1P02810 166 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 ITGA3P26006 1051 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 PPP1CCP36873 323 aaKnown RBP13.73□□□□□ -0.21
COMMD4-215ENST00000566843 FASLGP48023 281 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 SUMO3P55854 103 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-215ENST00000566843 GABREP78334 506 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 KCNMB1Q16558 191 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 Q3ZCU0 254 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 HIKESHIQ53FT3 197 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 C9orf152Q5JTZ5 239 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 SOHLH1Q5JUK2 328 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 SUMF2Q8NBJ7 301 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 NOXO1Q8NFA2 376 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 STT3BQ8TCJ2 826 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 POLR1DQ9Y2S0 133 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 A0A087WWC5 75 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 LILRA5A6NI73 299 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 PGA4P0DJD7 388 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 PGA3P0DJD8 388 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 DNLZQ5SXM8 178 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 PLXDC2Q6UX71 529 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 OR8G5Q8NG78 346 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 MVB12AQ96EY5 273 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 LRRC61Q9BV99 259 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 NAA60Q9H7X0 242 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 ZNF701Q9NV72 531 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-215ENST00000566843 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
COMMD4-215ENST00000566843 TLCD2A6NGC4 264 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 MSTNO14793 375 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 THEGLP0DJG4 465 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 RPS10P46783 165 aaKnown RBP13.72□□□□□ -0.21
COMMD4-215ENST00000566843 GFERP55789 205 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 FAM57BQ71RH2 274 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 WDR77Q9BQA1 342 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-215ENST00000566843 GAR1Q9NY12 217 aaKnown RBP13.72□□□□□ -0.21
COMMD4-215ENST00000566843 DOK5Q9P104 306 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 TCFL5Q9UL49 500 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 ADAMTS9Q9P2N4 1935 aa13.72□□□□□ -0.21
COMMD4-215ENST00000566843 ETV2O00321 342 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 FOSL2P15408 326 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 CTSSP25774 331 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 CTHP32929 405 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 CLRN1P58418 232 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 MFAP5Q13361 173 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 NSDHLQ15738 373 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 ZNF383Q8NA42 475 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 ADPRHL1Q8NDY3 354 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 OR5D18Q8NGL1 313 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 GUCD1Q96NT3 240 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 LIME1Q9H400 295 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 BCO1Q9HAY6 547 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 ANXA10Q9UJ72 324 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 PUS1Q9Y606 427 aaKnown RBP eCLIP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 STMND1H3BQB6 276 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 RPL36A-HNRNPH2H7BZ11 118 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 RER1O15258 196 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 BCAT2O15382 392 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 ST8SIA5O15466 376 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 SERPINA2P20848 420 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 S100A2P29034 98 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 CDAP32320 146 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 PIGPP57054 158 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 GRB2P62993 217 aaKnown RBP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 C17orf67Q0P5P2 114 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 ZNF283Q8N7M2 679 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 APCDD1LQ8NCL9 501 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 LYZL4Q96KX0 146 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 RARRES2Q99969 163 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms