RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PNLDC1Q8NA58 520 aaKnown RBP12.8□□□□□ -0.36
COMMD4-212ENST00000565517 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 OR5T2Q8NGG2 359 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 FBLIM1Q8WUP2 373 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 TMEM158Q8WZ71 300 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 TFAP2CQ92754 450 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 UPRTQ96BW1 309 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 MDFIQ99750 246 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 RASSF4Q9H2L5 321 aa12.8□□□□□ -0.36
COMMD4-212ENST00000565517 DIMT1Q9UNQ2 313 aaKnown RBP12.8□□□□□ -0.36
COMMD4-212ENST00000565517 EXOSC1Q9Y3B2 195 aaKnown RBP12.8□□□□□ -0.36
COMMD4-212ENST00000565517 NKX6-3A6NJ46 265 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 OR2AT4A6NND4 320 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 NDUFB3O43676 98 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 GNAO1P09471 354 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 CCDC159P0C7I6 412 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 FPR2P25090 351 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 ETV1P50549 477 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 GMFBP60983 142 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 IL24Q13007 206 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 CNN3Q15417 329 aaKnown RBP12.79□□□□□ -0.36
COMMD4-212ENST00000565517 CCDC58Q4VC31 144 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 TMPRSS11AQ6ZMR5 421 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 ACP7Q6ZNF0 438 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 BTN2A1Q7KYR7 527 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 ZNF418Q8TF45 676 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-212ENST00000565517 FGGYQ96C11 551 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 ADAT3Q96EY9 351 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-212ENST00000565517 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 OCEL1Q9H607 264 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 SNTG1Q9NSN8 517 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 PLCXD1Q9NUJ7 323 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 CNOT2Q9NZN8 540 aaKnown RBP12.79□□□□□ -0.36
COMMD4-212ENST00000565517 NUP50Q9UKX7 468 aa12.79□□□□□ -0.36
COMMD4-212ENST00000565517 FAM230AA0A1W2PPH8 454 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 E9PI62 339 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 SIGLEC5O15389 551 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 SYNGR1O43759 233 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 ZFPL1O95159 310 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 PSG2P11465 335 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 PIPP12273 146 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-212ENST00000565517 ZNF20P17024 532 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 MYL12AP19105 171 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 IL13RA1P78552 427 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 MED21Q13503 144 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 SMIM21Q3B7S5 101 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 KLF17Q5JT82 389 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-212ENST00000565517 CALHM1Q8IU99 346 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 LY6G5BQ8NDX9 201 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 OR13C3Q8NGS6 347 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 TRMT10AQ8TBZ6 339 aaKnown RBP12.78□□□□□ -0.36
COMMD4-212ENST00000565517 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 GGHQ92820 318 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 BORCS8Q96FH0 119 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 COMMD4Q9H0A8 199 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 HES4Q9HCC6 221 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 RPUSD1Q9UJJ7 312 aaKnown RBP12.78□□□□□ -0.36
COMMD4-212ENST00000565517 ZNF222Q9UK12 451 aa12.78□□□□□ -0.36
COMMD4-212ENST00000565517 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 IGKV1-27A0A075B6S5 117 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 TRBV2A0A0J9YWF9 115 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 A0A1B0GW55 424 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 ZNF879B4DU55 563 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 ALX3O95076 343 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 MT-ND2P03891 347 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L2P0CJ85 424 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L3P0CJ86 424 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L4P0CJ87 422 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L5P0CJ88 424 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L6P0CJ89 424 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L7P0CJ90 424 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 ATF1P18846 271 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 PRKACBP22694 351 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 RBP2P50120 134 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 ATP1B3P54709 279 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 CAV3P56539 151 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 RPL22L1Q6P5R6 122 aaKnown RBP12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4L9Q6RFH8 374 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-212ENST00000565517 ANGPTL5Q86XS5 388 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 OR51A4Q8NGJ6 313 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 OR10AC1Q8NH08 325 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 RPS4Y2Q8TD47 263 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 NRG4Q8WWG1 115 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 SDSLQ96GA7 329 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 SUCNR1Q9BXA5 334 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 CNTD2Q9H8S5 307 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 CHCHD3Q9NX63 227 aaKnown RBP12.77□□□□□ -0.37
COMMD4-212ENST00000565517 BABAM2Q9NXR7 383 aa12.77□□□□□ -0.37
COMMD4-212ENST00000565517 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms