RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GCDHQ92947 438 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-210ENST00000564587 S100PBPQ96BU1 408 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 RNF170Q96K19 258 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 Q96M66 194 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 RTL8AQ9BWD3 113 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 OR2J1Q9GZK6 312 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 JKAMPQ9P055 326 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 TINAGQ9UJW2 476 aa13.36□□□□□ -0.27
COMMD4-210ENST00000564587 IGHV2OR16-5A0A0B4J2B6 119 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A10PA6NDY2 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A18PA6NE21 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A16PA6NEW6 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 TMEM235A6NFC5 223 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A20PA6NIJ5 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A8PA6NJQ4 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A7PA6NKC0 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A22PA8MWA6 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A12PA8MX19 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A5PA8MXJ8 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A23PA8MXZ1 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 ZNF732B4DXR9 585 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 TCRBP04435 133 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A15PP0C7V4 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A13PP0C7W8 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A14PP0C7W9 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 FAM90A24PP0C7X0 464 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 TRAPPC2P0DI81 140 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 TRAPPC2BP0DI82 140 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 PTHLHP12272 177 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 GIFP27352 417 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 GCH1P30793 250 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 BTCP35070 178 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 PRSS12P56730 875 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 MZT1Q08AG7 82 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 MEF2DQ14814 521 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 ELP2Q6IA86 826 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 OSR2Q8N2R0 312 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 ZNF611Q8N823 705 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 OR56B4Q8NH76 319 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 HPSE2Q8WWQ2 592 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 MARS2Q96GW9 593 aaKnown RBP13.35□□□□□ -0.27
COMMD4-210ENST00000564587 DMRTA2Q96SC8 542 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 NICN1Q9BSH3 213 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 PKIBQ9C010 78 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 OR51B6Q9H340 312 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 HSF4Q9ULV5 492 aa13.35□□□□□ -0.27
COMMD4-210ENST00000564587 A0A0A6YYD4 124 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 FOXI3A8MTJ6 420 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 C16orf97H3BN30 126 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 MFNGO00587 321 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 SOCS1O15524 211 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 CRYAAP02489 173 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 MT-ND4P03905 459 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 PPP3CBP16298 524 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 KITLGP21583 273 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 HLA-DMAP28067 261 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 BLVRBP30043 206 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 PMELP40967 661 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 RPS23P62266 143 aaKnown RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 NAAAQ02083 359 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 GUCA2AQ02747 115 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 ACTBL2Q562R1 376 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 DMRTC1Q5HYR2 192 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 MBNL2Q5VZF2 373 aaKnown RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 STEAP1BQ6NZ63 245 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 TRAPPC6BQ86SZ2 158 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 FJX1Q86VR8 437 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 SPERTQ8NA61 448 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 OR10K1Q8NGX5 313 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 OR8S1Q8NH09 359 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 KLF14Q8TD94 323 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 PLK3Q9H4B4 646 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 IFT46Q9NQC8 304 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 NKIRAS2Q9NYR9 191 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 MEMO1Q9Y316 297 aa13.34□□□□□ -0.27
COMMD4-210ENST00000564587 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
COMMD4-210ENST00000564587 A0A1W2PP11 408 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 ZNF736B4DX44 427 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-210ENST00000564587 ANGPTL7O43827 346 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 CD74P04233 296 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 GNB3P16520 340 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 CA7P43166 264 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 HAAOP46952 286 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 GPM6AP51674 278 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 TMEM50BP56557 158 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 IL24Q13007 206 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 ZMYND11Q15326 602 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 NHLRC3Q5JS37 347 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 SPATA46Q5T0L3 261 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 SLC25A26Q70HW3 274 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 OR8G5Q8NG78 346 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 OCSTAMPQ9BR26 566 aa13.33□□□□□ -0.28
COMMD4-210ENST00000564587 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
COMMD4-210ENST00000564587 MCUBQ9NWR8 336 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms