RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CTNSO60931 367 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 RDH16O75452 317 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 ADAP1O75689 374 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 TNFAIP8O95379 198 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 ARL2P36404 184 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 MYCNOSP40205 109 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 MAGEA3P43357 314 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 XKP51811 444 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 AP1S2P56377 157 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 GUSBP1Q15486 140 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 EXOC3L4Q17RC7 722 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 FAM27D1Q5T7N8 215 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 OR2T5Q6IEZ7 315 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 FBXW12Q6X9E4 464 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 Q6ZT83 130 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 CA13Q8N1Q1 262 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 OR2T29Q8NH02 315 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 FAM19A4Q96LR4 140 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 CDX2Q99626 313 aaPredicted RBP2.04□□□□□ -2.08
UBR1-205ENST00000564540 ZNF251Q9BRH9 671 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 PCDH11XQ9BZA7 1347 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 TMBIM4Q9HC24 238 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 ACOT13Q9NPJ3 140 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 IFT46Q9NQC8 304 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 IMP3Q9NV31 184 aaKnown RBP2.04□□□□□ -2.08
UBR1-205ENST00000564540 NLE1Q9NVX2 485 aaPredicted RBP2.04□□□□□ -2.08
UBR1-205ENST00000564540 RHBDL2Q9NX52 303 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 PSMD13Q9UNM6 376 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 ACOT9Q9Y305 439 aa2.04□□□□□ -2.08
UBR1-205ENST00000564540 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 FHOD3Q2V2M9 1422 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 BRD4O60885 1362 aaPredicted RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 M0R1B8 84 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 TOX3O15405 576 aaPredicted RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 GATCO43716 136 aaKnown RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 SHOX2O60902 331 aaPredicted RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 CRTAPO75718 401 aaPredicted RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 CD8AP01732 235 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 P0C880 135 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 HSPD1P10809 573 aaKnown RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 PCK1P35558 622 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 CDC34P49427 236 aaPredicted RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 OR10A3P58181 314 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 PPP1CBP62140 327 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 DGCR6Q14129 220 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 QPRTQ15274 297 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 CDKL4Q5MAI5 379 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 RESP18Q5W5W9 173 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 PTRHD1Q6GMV3 140 aaKnown RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 PLEKHG7Q6ZR37 379 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 CRLF3Q8IUI8 442 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 SLC30A8Q8IWU4 369 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 ATPAF2Q8N5M1 289 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 DNAAF3Q8N9W5 541 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 ZNF738Q8NE65 137 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 RNASEH2CQ8TDP1 164 aaKnown RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 ZCCHC13Q8WW36 166 aaKnown RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 RORBQ92753 470 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 BTN2A3PQ96KV6 586 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 ZNF488Q96MN9 340 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 SLIRPQ9GZT3 109 aaKnown RBP2.03□□□□□ -2.08
UBR1-205ENST00000564540 PORCNQ9H237 461 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 ARV1Q9H2C2 271 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 WDR54Q9H977 334 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 RGS18Q9NS28 235 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 TREX1Q9NSU2 369 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 DDIT4Q9NX09 232 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 NKIRAS1Q9NYS0 192 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 ZNF391Q9UJN7 358 aa2.03□□□□□ -2.08
UBR1-205ENST00000564540 RAD50Q92878 1312 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 USP42Q9H9J4 1324 aaKnown RBP2.02□□□□□ -2.09
UBR1-205ENST00000564540 IGHV3OR16-9A0A0B4J2B5 98 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 IGHV2OR16-5A0A0B4J2B6 119 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 A0A1B0GTI1 187 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 A0A1B0GX12 115 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 SYCE1LA8MT33 242 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 C16orf90A8MZG2 172 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 LINC01619G3V211 115 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 SULT1C2O00338 296 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 ZNF593O00488 134 aaPredicted RBP2.02□□□□□ -2.09
UBR1-205ENST00000564540 CDIPTO14735 213 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 AQP9O43315 295 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 CDC40O60508 579 aaKnown RBP eCLIP2.02□□□□□ -2.09
UBR1-205ENST00000564540 CD74P04233 296 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 OR5AL1P0C617 328 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 OCMP0CE72 109 aaPredicted RBP2.02□□□□□ -2.09
UBR1-205ENST00000564540 ERGP11308 486 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 RAB3BP20337 219 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 DTYMKP23919 212 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 GGT2P36268 569 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 RGS6P49758 472 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 NDUFA8P51970 172 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 AQP5P55064 265 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 TSPAN5P62079 268 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 RPS23P62266 143 aaKnown RBP2.02□□□□□ -2.09
UBR1-205ENST00000564540 SLC35A1P78382 337 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 STX4Q12846 297 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 IL15RAQ13261 267 aa2.02□□□□□ -2.09
UBR1-205ENST00000564540 OR1Q1Q15612 314 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms