RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 C1orf198Q9H425 327 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 UBE2ZQ9H832 354 aaPredicted RBP3.88□□□□□ -1.79
CHD9-206ENST00000562791 BEX1Q9HBH7 125 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 SGK2Q9HBY8 427 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 RAB9BQ9NP90 201 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 ACOT13Q9NPJ3 140 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 EXOSC3Q9NQT5 275 aaKnown RBP3.88□□□□□ -1.79
CHD9-206ENST00000562791 CBLN4Q9NTU7 201 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 LYRM2Q9NU23 88 aaPredicted RBP3.88□□□□□ -1.79
CHD9-206ENST00000562791 TMEM161AQ9NX61 479 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 B3GAT1Q9P2W7 334 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 FBXL17Q9UF56 701 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 CMAHPQ9Y471 501 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 LIPGQ9Y5X9 500 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 KPTNQ9Y664 436 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 SMAD5-AS1Q9Y6J3 95 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 LTN1O94822 1766 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 SAMD9LQ8IVG5 1584 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 LRP5O75197 1615 aa3.88□□□□□ -1.79
CHD9-206ENST00000562791 DNMT1P26358 1616 aaKnown RBP3.88□□□□□ -1.79
CHD9-206ENST00000562791 ECM29Q5VYK3 1845 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ATAD5Q96QE3 1844 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 DHRS12A0PJE2 317 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 MBLAC1A4D2B0 266 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 ZNF705EA8MWA4 302 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 H0Y980 276 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CLDN34H7C241 214 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CYB561D2O14569 222 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 OR7A17O14581 309 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 OR7C2O60412 319 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 GALR3O60755 368 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 SCELO95171 688 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SYNGR4O95473 234 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SIX6O95475 246 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 RAB36O95755 333 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 AIFM1O95831 613 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CLIC3O95833 236 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 IGHG3P01860 377 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 MT-ND4P03905 459 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 GBAP04062 536 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 H2AFZP0C0S5 128 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 LIFP15018 202 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 MGMTP16455 207 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CXCL2P19875 107 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 PSMA1P25786 263 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 GDF1P27539 372 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CMPK1P30085 196 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CTBP2P56545 445 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 PIGPP57054 158 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 LSM3P62310 102 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 SNRPD1P62314 119 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 PAX5Q02548 391 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ZNF235Q14590 738 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TMEM132DQ14C87 1099 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 EBPQ15125 230 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 RHEBQ15382 184 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SNAI3Q3KNW1 292 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TMEM69Q5SWH9 247 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SUSD4Q5VX71 490 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SLC39A4Q6P5W5 647 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 PRSS54Q6PEW0 395 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ALKAL2Q6UX46 152 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 H2AFVQ71UI9 128 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 OLIG3Q7RTU3 272 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CENPVQ7Z7K6 275 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 RNF149Q8NC42 400 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 HJURPQ8NCD3 748 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 ST6GALNAC3Q8NDV1 305 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SDR9C7Q8NEX9 313 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TMEM185AQ8NFB2 350 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SLC26A10Q8NG04 563 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 OR2T12Q8NG77 320 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 OR5W2Q8NH69 310 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TNFAIP8L1Q8WVP5 186 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 MCHR2Q969V1 340 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TNFRSF13CQ96RJ3 184 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SIGMAR1Q99720 223 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SOSTQ9BQB4 213 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SRSF8Q9BRL6 282 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TMEM39BQ9GZU3 492 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ZBP1Q9H171 429 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 S1PR5Q9H228 398 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TXNIPQ9H3M7 391 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ALG9Q9H6U8 611 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 PATZ1Q9HBE1 687 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 LRTM1Q9HBL6 345 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ZNF71Q9NQZ8 489 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 PXMP2Q9NR77 195 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 NECAP2Q9NVZ3 263 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 MARCH5Q9NX47 278 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SLC2A8Q9NY64 477 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 FARSAQ9Y285 508 aaKnown RBP3.87□□□□□ -1.79
CHD9-206ENST00000562791 SLC17A4Q9Y2C5 497 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 YIPF1Q9Y548 306 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 TIMM10BQ9Y5J6 103 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 SPATA31D1Q6ZQQ2 1576 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 ALKQ9UM73 1620 aa3.87□□□□□ -1.79
CHD9-206ENST00000562791 RGPD8O14715 1765 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms