RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 FABP5Q01469 135 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 LOXL1Q08397 574 aaPredicted RBP8.19□□□□□ -1.1
CLK3-208ENST00000562626 NEDD8Q15843 81 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 Q499Y3 187 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 FAM90A1Q86YD7 464 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 DEFB108BQ8NET1 73 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 OR52N4Q8NGI2 321 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 OR5D18Q8NGL1 313 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 UFD1Q92890 307 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 ITFG2Q969R8 447 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 C10orf35Q96D05 121 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 TMEM246Q9BRR3 403 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 ZNF696Q9H7X3 374 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 ABCB9Q9NP78 766 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 ISYNA1Q9NPH2 558 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 NOX4Q9NPH5 578 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 MTCH1Q9NZJ7 389 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 IL36RNQ9UBH0 155 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 CTSZQ9UBR2 303 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 NOP16Q9Y3C1 178 aaKnown RBP8.19□□□□□ -1.1
CLK3-208ENST00000562626 MTORP42345 2549 aa8.19□□□□□ -1.1
CLK3-208ENST00000562626 PPIAL4EA0A075B759 164 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SHISA3A0PJX4 238 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 TRIM64CA6NLI5 447 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 CEACAM18A8MTB9 384 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 PPIAL4DF5H284 164 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 J3QT63 122 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SULT1B1O43704 296 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 ANGPTL7O43827 346 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 GATBO75879 557 aaKnown RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 IGHV2-5P01817 119 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 PGA5P0DJD9 388 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 PPIAL4FP0DN26 164 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 IGHV4-31P0DP07 118 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 CALCBP10092 127 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SELLP14151 372 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 CD99P14209 185 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 ADRA2CP18825 462 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 PSMB9P28065 219 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 TGFBR2P37173 567 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 NPBWR2P48146 333 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 CEBPDP49716 269 aaPredicted RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 FUT6P51993 359 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 ZP1P60852 638 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 CNN3Q15417 329 aaKnown RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 ZNF404Q494X3 552 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 ACSM3Q53FZ2 586 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 Q71RC1 249 aaPredicted RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 C1QL2Q7Z5L3 287 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 LRRC28Q86X40 367 aaPredicted RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 LYPD6Q86Y78 171 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SERPINA12Q8IW75 414 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 DNAAF1Q8NEP3 725 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 TSPAN14Q8NG11 270 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 OR5T2Q8NGG2 359 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 OR11L1Q8NGX0 322 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 RAB1CQ92928 201 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 MUL1Q969V5 352 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 ERGIC1Q969X5 290 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SLAMF9Q96A28 289 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 CYYR1Q96J86 154 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 C18orf12Q96KH6 178 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 HIST1H2AAQ96QV6 131 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 GFI1Q99684 422 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SNTG1Q9NSN8 517 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 PPIAL4AQ9Y536 164 aa8.18□□□□□ -1.1
CLK3-208ENST00000562626 SONP18583 2426 aaKnown RBP8.18□□□□□ -1.1
CLK3-208ENST00000562626 OOEPA6NGQ2 149 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 F5H0A9 414 aaPredicted RBP8.17□□□□□ -1.1
CLK3-208ENST00000562626 LGALS8O00214 317 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 GABRPO00591 440 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 GPX5O75715 221 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 TNFAIP8O95379 198 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 LY6G6DO95868 133 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 GYPAP02724 150 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 HCKP08631 526 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 INHBBP09529 407 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 ZNF16P17020 682 aaPredicted RBP8.17□□□□□ -1.1
CLK3-208ENST00000562626 FSTP19883 344 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 BCL3P20749 454 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 CFHR2P36980 270 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 POU3F4P49335 361 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 MTCP1P56278 107 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 ERVK11-1P61568 191 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 MZT1Q08AG7 82 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 GPR50Q13585 617 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 SYT6Q5T7P8 510 aaPredicted RBP8.17□□□□□ -1.1
CLK3-208ENST00000562626 TEX36Q5VZQ5 186 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 SLC25A26Q70HW3 274 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 CEACAM19Q7Z692 300 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 LRRTM1Q86UE6 522 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 POC1AQ8NBT0 407 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 OR10Z1Q8NGY1 313 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 BORCS8Q96FH0 119 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 PKIBQ9C010 78 aa8.17□□□□□ -1.1
CLK3-208ENST00000562626 ZNF665Q9H7R5 613 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms