RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 SELLP14151 372 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 PEX2P28328 305 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 ARF6P62330 175 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 IL13RA1P78552 427 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 PDCD1Q15116 288 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 GPR157Q5UAW9 335 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 LPCAT4Q643R3 524 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 ACBD7Q8N6N7 88 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 OR2G2Q8NGZ5 317 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 LGALS12Q96DT0 336 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 PCGF1Q9BSM1 259 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 HES4Q9HCC6 221 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 C8orf4Q9NR00 106 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 ANK2Q01484 3957 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 A0A1B0GVI7 797 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 ANKRD61A6NGH8 418 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 A6NIN4 97 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 SYT7O43581 403 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 SYNGR1O43759 233 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 TFF1P04155 84 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 HAAOP46952 286 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 CCR9P51686 369 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 OR12D2P58182 307 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 GMFBP60983 142 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 ERVK11-1P61568 191 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 SLC9A3R2Q15599 337 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 UBE2V2Q15819 145 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 LRRC36Q1X8D7 754 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 METTL11BQ5VVY1 283 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 METAP1DQ6UB28 335 aaPredicted RBP17.02■□□□□ 0.32
TPM1-232ENST00000561425 BRD3OSQ6XYD6 125 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 ACP7Q6ZNF0 438 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 C1orf122Q6ZSJ8 110 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 KIR3DL3Q8N743 410 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 RDH12Q96NR8 316 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 NRIP2Q9BQI9 281 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 PKIBQ9C010 78 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 VCXQ9H320 206 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 FRRS1LQ9P0K9 344 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 GNG8Q9UK08 70 aa17.02■□□□□ 0.32
TPM1-232ENST00000561425 DAPL1A0PJW8 107 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 NKX6-3A6NJ46 265 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 RNASE1P07998 156 aaKnown RBP17.01■□□□□ 0.31
TPM1-232ENST00000561425 UBCP0CG48 685 aaKnown RBP17.01■□□□□ 0.31
TPM1-232ENST00000561425 DBTP11182 482 aaKnown RBP17.01■□□□□ 0.31
TPM1-232ENST00000561425 NANOS3P60323 173 aaKnown RBP17.01■□□□□ 0.31
TPM1-232ENST00000561425 BAMBIQ13145 260 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 IKZF1Q13422 519 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 DEFB112Q30KQ8 113 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 OGFRL1Q5TC84 451 aaPredicted RBP17.01■□□□□ 0.31
TPM1-232ENST00000561425 FAM220AQ7Z4H9 259 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 CALHM1Q8IU99 346 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 Q96MT0 163 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 CHST5Q9GZS9 411 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 VCX3BQ9H321 246 aa17.01■□□□□ 0.31
TPM1-232ENST00000561425 SLC25A10Q9UBX3 287 aaPredicted RBP17.01■□□□□ 0.31
TPM1-232ENST00000561425 IGHV1-69DA0A0B4J2H0 117 aa17■□□□□ 0.31
TPM1-232ENST00000561425 IGHV1-69P01742 117 aa17■□□□□ 0.31
TPM1-232ENST00000561425 IGHA1P01876 353 aa17■□□□□ 0.31
TPM1-232ENST00000561425 HKR1P10072 659 aa17■□□□□ 0.31
TPM1-232ENST00000561425 ZNF91Q05481 1191 aa17■□□□□ 0.31
TPM1-232ENST00000561425 IL24Q13007 206 aa17■□□□□ 0.31
TPM1-232ENST00000561425 ODF4Q2M2E3 257 aa17■□□□□ 0.31
TPM1-232ENST00000561425 TMEM244Q5VVB8 128 aa17■□□□□ 0.31
TPM1-232ENST00000561425 C12orf54Q6X4T0 127 aa17■□□□□ 0.31
TPM1-232ENST00000561425 Q6YL49 198 aa17■□□□□ 0.31
TPM1-232ENST00000561425 RDH10Q8IZV5 341 aa17■□□□□ 0.31
TPM1-232ENST00000561425 Q8N7P7 452 aa17■□□□□ 0.31
TPM1-232ENST00000561425 APH1BQ8WW43 257 aa17■□□□□ 0.31
TPM1-232ENST00000561425 GCDHQ92947 438 aaPredicted RBP17■□□□□ 0.31
TPM1-232ENST00000561425 NOX4Q9NPH5 578 aa17■□□□□ 0.31
TPM1-232ENST00000561425 POLDIP2Q9Y2S7 368 aa17■□□□□ 0.31
TPM1-232ENST00000561425 IGKV1-27A0A075B6S5 117 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 LOC107986453A0A1B0GWG9 222 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 ACTG1P63261 375 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 GALEQ14376 348 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 RUSC1-AS1Q66K80 236 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 SYS1Q8N2H4 156 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 CD177Q8N6Q3 437 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 PACRGLQ8N7B6 248 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 ZNRF1Q8ND25 227 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 TNFRSF14Q92956 283 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 PELI1Q96FA3 418 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 ZNF488Q96MN9 340 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 ADI1Q9BV57 179 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 UNKLQ9H9P5 680 aaKnown RBP16.99■□□□□ 0.31
TPM1-232ENST00000561425 MYRFQ9Y2G1 1151 aa16.99■□□□□ 0.31
TPM1-232ENST00000561425 MDFIC2A0A1B0GVS7 189 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 RFPL4AA6NLU0 287 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 RFPL4AL1F8VTS6 287 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 GATBO75879 557 aaKnown RBP16.98■□□□□ 0.31
TPM1-232ENST00000561425 GABRA2P47869 451 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 FUT6P51993 359 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 RAB40BQ12829 278 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 SMIM21Q3B7S5 101 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 VMO1Q7Z5L0 202 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 ANGPTL5Q86XS5 388 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 DNAAF1Q8NEP3 725 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 GATAD2BQ8WXI9 593 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 PP6455Q8WZ26 134 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms