RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 DLGAP1O14490 977 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 IGHV4-59P01825 116 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 ALPLP05186 524 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 PGA5P0DJD9 388 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 CCL1P22362 96 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 ATP6V1E1P36543 226 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 CEBPDP49716 269 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 CAV3P56539 151 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 SHISA2Q6UWI4 295 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 PNKDQ8N490 385 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 TRMT10AQ8TBZ6 339 aaKnown RBP14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 SSMEM1Q8WWF3 244 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 RORBQ92753 470 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 UBE2FQ969M7 185 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 PLEKHA1Q9HB21 404 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 IMPAD1Q9NX62 359 aa14.12□□□□□ -0.15
CDC42BPB-208ENST00000561271 ANKRD61A6NGH8 418 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 METTL15A6NJ78 407 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 DHRS7CA6NNS2 312 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 CAPZA1P52907 286 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 RAG2P55895 527 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 ZNF85Q03923 595 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 TP53I3Q53FA7 332 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 METAP1DQ6UB28 335 aaPredicted RBP14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 Q6ZSR3 168 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 CCDC121Q6ZUS5 278 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 FAM220AQ7Z4H9 259 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 LDLRAD3Q86YD5 345 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 ZNF573Q86YE8 665 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 CALHM1Q8IU99 346 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 FAM185AQ8N0U4 392 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 TMEM86BQ8N661 226 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 CD177Q8N6Q3 437 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 SGMS2Q8NHU3 365 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 RFKQ969G6 155 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 SDSLQ96GA7 329 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 DMRTB1Q96MA1 342 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 GNG8Q9UK08 70 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 POLDIP2Q9Y2S7 368 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 ORC6Q9Y5N6 252 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 POMT1Q9Y6A1 747 aa14.11□□□□□ -0.15
CDC42BPB-208ENST00000561271 TRRAPQ9Y4A5 3859 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 LOC107986453A0A1B0GWG9 222 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 RFPL4AA6NLU0 287 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 RFPL4AL1F8VTS6 287 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 SYT7O43581 403 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 SPRY1O43609 319 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 NXPH2O95156 264 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 RELBQ01201 579 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 GUCA2AQ02747 115 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 TMED1Q13445 227 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 ZIK1Q3SY52 487 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 PRSS35Q8N3Z0 413 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 TNFRSF14Q92956 283 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 NRIP2Q9BQI9 281 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 C19orf12Q9NSK7 152 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 RASL12Q9NYN1 266 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 USE1Q9NZ43 259 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 C1RLQ9NZP8 487 aa14.1□□□□□ -0.15
CDC42BPB-208ENST00000561271 TET2Q6N021 2002 aaPredicted RBP14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 TRBV23-1A0A0A0MS06 115 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 FAM230AA0A1W2PPH8 454 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 M0R1W7 72 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 NPFFO15130 113 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 GPR137BO60478 399 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 ENTPD6O75354 484 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 SULT1C4O75897 302 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 CRYBA1P05813 215 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 EEF1B2P24534 225 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 KIR3DL2P43630 455 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 IER3P46695 156 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 ALDH3A2P51648 485 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 ZFP1Q6P2D0 407 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 ANGPTL5Q86XS5 388 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 TBC1D15Q8TC07 691 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 HRASLS5Q96KN8 279 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 ZNRD1Q9P1U0 126 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 OR14J1Q9UGF5 321 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 FAM96BQ9Y3D0 163 aa14.09□□□□□ -0.15
CDC42BPB-208ENST00000561271 SLC1A7O00341 560 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 FBP1P09467 338 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 MPZP25189 248 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 SAA4P35542 130 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 ISL1P61371 349 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 UBE2V2Q15819 145 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 CBR4Q8N4T8 237 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 OR4F5Q8NH21 305 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 WFDC12Q8WWY7 111 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 DYRK2Q92630 601 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 RNF166Q96A37 237 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 RNFT2Q96EX2 444 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 MBOAT4Q96T53 435 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 CHST5Q9GZS9 411 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 METTL8Q9H825 291 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 HES4Q9HCC6 221 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 AASSQ9UDR5 926 aa14.08□□□□□ -0.16
CDC42BPB-208ENST00000561271 IGKV1-27A0A075B6S5 117 aa14.07□□□□□ -0.16
CDC42BPB-208ENST00000561271 MEIOCA2RUB1 952 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms