RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 OCMP0CE72 109 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-204ENST00000561065 CCL1P22362 96 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 CCR9P51686 369 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 GABPB1Q06547 395 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-204ENST00000561065 GALEQ14376 348 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 CDONQ4KMG0 1287 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 ATPAF1Q5TC12 328 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-204ENST00000561065 Q6ZSR3 168 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 ENTHD1Q8IYW4 607 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 DHRSXQ8N5I4 330 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 OR5T2Q8NGG2 359 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 OR14K1Q8NGZ2 314 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 PP6455Q8WZ26 134 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 PPP1R14AQ96A00 147 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 SLC25A28Q96A46 364 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 OR51I2Q9H344 312 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 DCLRE1BQ9H816 532 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
LMX1B-204ENST00000561065 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 A0A1B0GTI1 187 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 ANKRD61A6NGH8 418 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 J3QLW9 94 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 AKR7A2O43488 359 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 RHBDL1O75783 438 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 CYB5AP00167 134 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 DBTP11182 482 aaKnown RBP13.15□□□□□ -0.3
LMX1B-204ENST00000561065 ZNF19P17023 458 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 FUT6P51993 359 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 DLX1P56177 255 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 ARF6P62330 175 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 ZNF85Q03923 595 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 PRB3Q04118 309 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-204ENST00000561065 FOXL1Q12952 345 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 IL18R1Q13478 541 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 RCN1Q15293 331 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
LMX1B-204ENST00000561065 TP53I3Q53FA7 332 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 FDX2Q6P4F2 183 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 SSX6Q7RTT6 188 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 CMTM4Q8IZR5 234 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 SYS1Q8N2H4 156 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 LY6G5BQ8NDX9 201 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 LGALS12Q96DT0 336 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 GAFA1Q96PS6 74 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 MRPS18AQ9NVS2 196 aaKnown RBP13.15□□□□□ -0.3
LMX1B-204ENST00000561065 HSPE1-MOB4S4R3N1 261 aa13.15□□□□□ -0.3
LMX1B-204ENST00000561065 J3QRE1 110 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 ISG15P05161 165 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 MELTFP08582 738 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-204ENST00000561065 HAAOP46952 286 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 TGM4P49221 684 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 GBX2P52951 348 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-204ENST00000561065 IL13RA1P78552 427 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF91Q05481 1191 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 IKZF1Q13422 519 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 LRRC36Q1X8D7 754 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 ODF4Q2M2E3 257 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 SMIM21Q3B7S5 101 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 TMEM42Q69YG0 159 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 HAGHLQ6PII5 290 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-204ENST00000561065 Q6YL49 198 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 TMPRSS11AQ6ZMR5 421 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 PDZD9Q8IXQ8 264 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 OR2G2Q8NGZ5 317 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 CYGBQ8WWM9 190 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 LHX4Q969G2 390 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
LMX1B-204ENST00000561065 TNFRSF19Q9NS68 423 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 HHLA2Q9UM44 414 aa13.14□□□□□ -0.31
LMX1B-204ENST00000561065 IGHV1-69DA0A0B4J2H0 117 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 J3QT63 122 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 IGHV1-69P01742 117 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF20P17024 532 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 GABRB1P18505 474 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-204ENST00000561065 PRKACBP22694 351 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 DCKP27707 260 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 GABRA2P47869 451 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ISL1P61371 349 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 DGUOKQ16854 277 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF788Q6ZQV5 615 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 VMO1Q7Z5L0 202 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 LHFPL3Q86UP9 236 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF676Q8N7Q3 588 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ANGPTL6Q8NI99 470 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 TBC1D15Q8TC07 691 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 AQP3Q92482 292 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ALG8Q9BVK2 526 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 CHIAQ9BZP6 476 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 COMMD4Q9H0A8 199 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 CNTD2Q9H8S5 307 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms