RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 GP1BBP13224 206 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FOLR2P14207 255 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 MYOGP15173 224 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FOSL2P15408 326 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 HPGDP15428 266 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 RPS2P15880 293 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 HIST1H1DP16402 221 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 ABOP16442 354 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 DRD1P21728 446 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CXCR1P25024 350 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CD1CP29017 333 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 IL12BP29460 328 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 HRH1P35367 487 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ALDH3B1P43353 468 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CBX5P45973 191 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 DNASE1L1P49184 302 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 HOXA1P49639 335 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 STARP49675 285 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 DAP3P51398 398 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 BLKP51451 505 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PRKXP51817 358 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PNLIPRP2P54317 469 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CLDN6P56747 220 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 RAP1BP61224 184 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 RAP1AP62834 184 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 S100A12P80511 92 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CYCSP99999 105 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SPOCK1Q08629 439 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PLCXD2Q0VAA5 305 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PJVKQ0ZLH3 352 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 IL15RAQ13261 267 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 EIF2B1Q14232 305 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SURF2Q15527 256 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZNF239Q16600 458 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SLC25A53Q5H9E4 307 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PIK3CD-AS1Q5SR53 167 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 GLYATL3Q5SZD4 288 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 C1orf140Q5VVS0 124 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TMEM268Q5VZI3 342 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FAM109BQ6ICB4 259 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 C3orf33Q6P1S2 294 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PRSS54Q6PEW0 395 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FBXO46Q6PJ61 603 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 Q6ZSR3 168 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 Q6ZSR6 202 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SLC35D2Q76EJ3 337 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 Q7L0L9 218 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 GRINAQ7Z429 371 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 DCXRQ7Z4W1 244 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 MDGA2Q7Z553 956 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TMED4Q7Z7H5 227 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 TRAPPC6BQ86SZ2 158 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 NAA40Q86UY6 237 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 FJX1Q86VR8 437 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PARGQ86W56 976 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 LHFPL1Q86WI0 220 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 C17orf82Q86X59 251 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 MISPQ8IVT2 679 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SPAG16Q8N0X2 631 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 OR5AS1Q8N127 324 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SLC22A24Q8N4F4 322 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ARRDC1Q8N5I2 433 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 JAGN1Q8N5M9 183 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 C10orf53Q8N6V4 93 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZNF321PQ8N8H1 164 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZSCAN4Q8NAM6 433 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 POC1AQ8NBT0 407 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ACBD4Q8NC06 268 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 NOXO1Q8NFA2 376 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 OR1M1Q8NGA1 313 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 OR4K17Q8NGC6 315 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 OR5AP2Q8NGF4 316 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 OR10R2Q8NGX6 335 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 MFSD8Q8NHS3 518 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ZNF563Q8TA94 476 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 NUBPLQ8TB37 319 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 THAP6Q8TBB0 222 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 GPR119Q8TDV5 335 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ST8SIA1Q92185 356 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TSLPQ969D9 159 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TMEM230Q96A57 120 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 MMABQ96EY8 250 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SAT2Q96F10 170 aaPredicted RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 RRNAD1Q96FB5 475 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SMIM8Q96KF7 97 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TSNAXQ99598 290 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 MAP3K3Q99759 626 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 CMKLR1Q99788 373 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 NRIP2Q9BQI9 281 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PDCD10Q9BUL8 212 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 RPP25Q9BUL9 199 aaKnown RBP2.14□□□□□ -2.07
SPG11-223ENST00000560858 SEC11CQ9BY50 192 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 SLC5A7Q9GZV3 580 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 WWTR1Q9GZV5 400 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 LPAR5Q9H1C0 372 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 TMEM185BQ9H7F4 350 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 PDE7BQ9NP56 450 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 RAB18Q9NP72 206 aa2.14□□□□□ -2.07
SPG11-223ENST00000560858 ACKR4Q9NPB9 350 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms