RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GPR157Q5UAW9 335 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 TTC23Q5W5X9 447 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 TMEM42Q69YG0 159 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 USP43Q70EL4 1123 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 DHRSXQ8N5I4 330 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SETD9Q8NE22 299 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 TMEM185AQ8NFB2 350 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 CNIH3Q8TBE1 160 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 UPRTQ96BW1 309 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 PELI1Q96FA3 418 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 BORCS8Q96FH0 119 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 DNTTIP1Q9H147 329 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 SLC25A10Q9UBX3 287 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL2-209ENST00000560620 A0A1W2PQ09 198 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 FUT6P51993 359 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 GBX2P52951 348 aaPredicted RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 NANOS3P60323 173 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 ALKBH1Q13686 389 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 CNN3Q15417 329 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 UBE2V2Q15819 145 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 BRD3OSQ6XYD6 125 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 CMTM4Q8IZR5 234 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 PACRGLQ8N7B6 248 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 SIGLECL1Q8N7X8 197 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 POC1AQ8NBT0 407 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNRF1Q8ND25 227 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR52I1Q8NGK6 324 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR13C3Q8NGS6 347 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 ANGPTL6Q8NI99 470 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 APH1BQ8WW43 257 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 PP6455Q8WZ26 134 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 DACT3Q96B18 629 aaPredicted RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 FGGYQ96C11 551 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 C10orf35Q96D05 121 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 WDFY2Q96P53 400 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 GAFA1Q96PS6 74 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 VCXQ9H320 206 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 CNTD2Q9H8S5 307 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 ISG20L2Q9H9L3 353 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 INPP5EQ9NRR6 644 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 ERVK13-1Q9NX77 482 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 RASL12Q9NYN1 266 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR14J1Q9UGF5 321 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 RPUSD1Q9UJJ7 312 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 HHLA2Q9UM44 414 aa10.74□□□□□ -0.69
CTDSPL2-209ENST00000560620 IGKV1D-17A0A075B6S4 117 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ERICH4A6NGS2 130 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 RFPL4AA6NLU0 287 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 RFPL4AL1F8VTS6 287 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 SLC1A7O00341 560 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 GPR37O15354 613 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 SIGLEC5O15389 551 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 FCN3O75636 299 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 IGHA1P01876 353 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ACAA1P09110 424 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 PSG2P11465 335 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 TGM4P49221 684 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 CCR9P51686 369 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 BAMBIQ13145 260 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 DGUOKQ16854 277 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 C11orf91Q3C1V1 193 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ATPAF1Q5TC12 328 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF691Q5VV52 312 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ACP7Q6ZNF0 438 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF788Q6ZQV5 615 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 Q6ZSR3 168 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 CALHM1Q8IU99 346 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 PDZD9Q8IXQ8 264 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 SYS1Q8N2H4 156 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 LHX4Q969G2 390 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 ADAT3Q96EY9 351 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 DUX5Q96PT3 197 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 CHST5Q9GZS9 411 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 COMMD4Q9H0A8 199 aa10.73□□□□□ -0.69
CTDSPL2-209ENST00000560620 IRGMA1A4Y4 181 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 WBP4O75554 376 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 CYB5AP00167 134 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 ISG15P05161 165 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 PGA5P0DJD9 388 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 MYL12AP19105 171 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 AMY2BP19961 511 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 POU3F4P49335 361 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 CEBPDP49716 269 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 RBP2P50120 134 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 ATP1B3P54709 279 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 MTCP1P56278 107 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 IL24Q13007 206 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 MRPL28Q13084 256 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 MED21Q13503 144 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 PDCD1Q15116 288 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 FDX2Q6P4F2 183 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 TMPRSS11AQ6ZMR5 421 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 SLC25A26Q70HW3 274 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR5AK2Q8NH90 309 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZFAND2BQ8WV99 257 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 TSEN15Q8WW01 171 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms