RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 KCTD7Q96MP8 289 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 WWC2-AS2Q96NR7 200 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 SLIRPQ9GZT3 109 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 NXF2Q9GZY0 626 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 PRDM13Q9H4Q3 707 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ELOVL3Q9HB03 270 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 PNRC2Q9NPJ4 139 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 IKZF2Q9UKS7 526 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 LRP12Q9Y561 859 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 TANC2Q9HCD6 1990 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 TRBV5-5A0A0J9YX44 114 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 LOC100506127A0A0U1RQW1 187 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 BTBD17A6NE02 478 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ANKRD61A6NGH8 418 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ZSCAN5BA6NJL1 495 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 GABRPO00591 440 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ARL6IP5O75915 188 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ZFPL1O95159 310 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 APOC1P02654 83 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 MAPK3P27361 379 aaPredicted RBP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 CDAP32320 146 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 SERPINB10P48595 397 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 MTNR1BP49286 362 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 NANOS3P60323 173 aaKnown RBP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 PSMA6P60900 246 aaKnown RBP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 PCBD1P61457 104 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 RPS11P62280 158 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 SCRN3Q0VDG4 424 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ECH1Q13011 328 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ZNF829Q3KNS6 432 aaPredicted RBP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 KRTAP27-1Q3LI81 207 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 SPATA46Q5T0L3 261 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 DHRS7BQ6IAN0 325 aaPredicted RBP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 C11orf87Q6NUJ2 197 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 KRT77Q7Z794 578 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 TPRA1Q86W33 373 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 CATSPERDQ86XM0 798 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 ZFP41Q8N8Y5 198 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 NDNFQ8TB73 568 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 PCGF1Q9BSM1 259 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 TMED9Q9BVK6 235 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 COMMD4Q9H0A8 199 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 HDHD2Q9H0R4 259 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 AURKAIP1Q9NWT8 199 aaPredicted RBP7.74□□□□□ -1.17
SMAD3-215ENST00000560424 R4GMQ9 66 aa7.74□□□□□ -1.17
SMAD3-215ENST00000560424 PLXNB1O43157 2135 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 A0A075B6Q4 140 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 TRAV1-2A0A0B4J238 106 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 CEACAM18A8MTB9 384 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 F5H0A9 414 aaPredicted RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 MAGEB4O15481 346 aaPredicted RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 TIMM8AO60220 97 aaPredicted RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 SFTPBP07988 381 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 CD55P08174 381 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 UCHL1P09936 223 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 H2BFMP0C1H6 154 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 COX5BP10606 129 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 CFL1P23528 166 aaKnown RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 CPT2P23786 658 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 FGF12P61328 243 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 LSM3P62310 102 aaKnown RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 ZMYND11Q15326 602 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 ACSM3Q53FZ2 586 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 WDR38Q5JTN6 314 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 C22orf42Q6IC83 251 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 CFAP77Q6ZQR2 320 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 NLRC3Q7RTR2 1065 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 LINC00346Q8IVM7 164 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 PRSS35Q8N3Z0 413 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 SCCPDHQ8NBX0 429 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 OR8B3Q8NGG8 313 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 OR5AK2Q8NH90 309 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 FGFBP3Q8TAT2 258 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 GPR148Q8TDV2 347 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 ITFG2Q969R8 447 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM203Q969S6 136 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 SLC25A46Q96AG3 418 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 OR8B2Q96RD0 313 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 KCNJ15Q99712 375 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 NUDT16L1Q9BRJ7 211 aaKnown RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 DCUN1D5Q9BTE7 237 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 DPAGT1Q9H3H5 408 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 MSL2Q9HCI7 577 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 EMC7Q9NPA0 242 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 EXOSC4Q9NPD3 245 aaKnown RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 FAM206AQ9NX38 181 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 DCAF16Q9NXF7 216 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 MIOXQ9UGB7 285 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 NUFIP1Q9UHK0 495 aaKnown RBP7.73□□□□□ -1.17
SMAD3-215ENST00000560424 PPP1R3CQ9UQK1 317 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 POLR1DQ9Y2S0 133 aa7.73□□□□□ -1.17
SMAD3-215ENST00000560424 PNMA8CA0A1B0GUJ8 204 aa7.72□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM269A0A1B0GVZ9 245 aa7.72□□□□□ -1.17
SMAD3-215ENST00000560424 OR6C6A6NF89 314 aa7.72□□□□□ -1.17
SMAD3-215ENST00000560424 ZNF879B4DU55 563 aa7.72□□□□□ -1.17
SMAD3-215ENST00000560424 H0YL77 283 aa7.72□□□□□ -1.17
SMAD3-215ENST00000560424 PSMD9O00233 223 aa7.72□□□□□ -1.17
SMAD3-215ENST00000560424 RER1O15258 196 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms