RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LRRTM1Q86UE6 522 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 CPEB3Q8NE35 698 aaKnown RBP17.34■□□□□ 0.37
PSEN1-225ENST00000560005 OR5L1Q8NGL2 311 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 BORCS5Q969J3 196 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 APOBEC3DQ96AK3 386 aaPredicted RBP17.34■□□□□ 0.37
PSEN1-225ENST00000560005 FGGYQ96C11 551 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 OPA3Q9H6K4 179 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 PLEKHA1Q9HB21 404 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 PPIAL4AQ9Y536 164 aa17.34■□□□□ 0.37
PSEN1-225ENST00000560005 A0A0G2JMP0 313 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 A0A0X1KG70 313 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 IFITM5A6NNB3 132 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 AIPO00170 330 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 CTDSP2O14595 271 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 NCR1O76036 304 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 ALX3O95076 343 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 DDOSTP39656 456 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 MAGEB1P43366 347 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 MAP2K3P46734 347 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 CAV3P56539 151 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 MALLQ13021 153 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 DCTN2Q13561 401 aaKnown RBP17.33■□□□□ 0.36
PSEN1-225ENST00000560005 TBC1D28Q2M2D7 210 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 UNQ6126/PRO20091Q6UXV3 157 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 NAA40Q86UY6 237 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 LRP11Q86VZ4 500 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 CDH26Q8IXH8 852 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 OR4M2Q8NGB6 313 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 C22orf15Q8WYQ4 148 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 PP6455Q8WZ26 134 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 SLC7A6Q92536 515 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 SGK3Q96BR1 496 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 POM121L2Q96KW2 1035 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 PALMDQ9NP74 551 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 AKIP1Q9NQ31 210 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 DAPK2Q9UIK4 370 aa17.33■□□□□ 0.36
PSEN1-225ENST00000560005 C5orf49A4QMS7 147 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 RP2O75695 350 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 MAS1P04201 325 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 CALCBP10092 127 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 RAB3AP20336 220 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 PTBP1P26599 531 aaKnown RBP eCLIP17.32■□□□□ 0.36
PSEN1-225ENST00000560005 CD40LGP29965 261 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 METAP1DQ6UB28 335 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-225ENST00000560005 OR14K1Q8NGZ2 314 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 NANPQ8TBE9 248 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 MS4A3Q96HJ5 214 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 REEP6Q96HR9 211 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 FAM71F1Q96KD3 344 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-225ENST00000560005 SLC30A2Q9BRI3 323 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 TMEM138Q9NPI0 162 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF319Q9P2F9 582 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 MYEF2Q9P2K5 600 aaKnown RBP17.32■□□□□ 0.36
PSEN1-225ENST00000560005 COMMD3Q9UBI1 195 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 RABL2AQ9UBK7 228 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-225ENST00000560005 EIF3KQ9UBQ5 218 aaKnown RBP17.32■□□□□ 0.36
PSEN1-225ENST00000560005 FZR1Q9UM11 496 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 RABL2BQ9UNT1 228 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 V9GYS6 101 aa17.32■□□□□ 0.36
PSEN1-225ENST00000560005 MAGEB3O15480 346 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 CD37P11049 281 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 NAT2P11245 290 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 BDKRB2P30411 391 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 TNFSF8P32971 234 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 OR10A3P58181 314 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 MRPS11P82912 194 aaKnown RBP17.31■□□□□ 0.36
PSEN1-225ENST00000560005 ZBTB37Q5TC79 503 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 C1orf174Q8IYL3 243 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 SLC30A7Q8NEW0 376 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 OR1M1Q8NGA1 313 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF671Q8TAW3 534 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 ABCB9Q9NP78 766 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 TBCCD1Q9NVR7 557 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 TAS2R4Q9NYW5 299 aa17.31■□□□□ 0.36
PSEN1-225ENST00000560005 TRAV8-7A0A075B6U6 113 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 LOC100509620A0A075B734 347 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 SMIM30A4D0T7 59 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 H3BSH0 61 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 ALDOBP05062 364 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 TUBG1P23258 451 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 GLRXP35754 106 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 PPP5CP53041 499 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 RIPPLY1Q0D2K3 151 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 GFOD2Q3B7J2 385 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 AVPI1Q5T686 147 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 UTS2BQ765I0 119 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 CCDC190Q86UF4 302 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 NR2C2APQ86WQ0 139 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 SPSB4Q96A44 273 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 CDH20Q9HBT6 801 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 TUBG2Q9NRH3 451 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 STEAP1Q9UHE8 339 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 SPATA2Q9UM82 520 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 ETV7Q9Y603 341 aa17.3■□□□□ 0.36
PSEN1-225ENST00000560005 J3QLI3 93 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 ZNF35P13682 527 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 CCNOP22674 350 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 TALDO1P37837 337 aa17.29■□□□□ 0.36
PSEN1-225ENST00000560005 SNAI3Q3KNW1 292 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms