RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 RBPMSQ93062 196 aaKnown RBP7.04□□□□□ -1.28
SMAD3-212ENST00000559937 PIGTQ969N2 578 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 BORCS8Q96FH0 119 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 ALKBH3Q96Q83 286 aaPredicted RBP7.04□□□□□ -1.28
SMAD3-212ENST00000559937 C1QTNF5Q9BXJ0 243 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 SLC25A32Q9H2D1 315 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 FN3KRPQ9HA64 309 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 BCO1Q9HAY6 547 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 GPR173Q9NS66 373 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 EHFQ9NZC4 300 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 FOXJ2Q9P0K8 574 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 PFDN2Q9UHV9 154 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 MCTS1Q9ULC4 181 aaKnown RBP7.04□□□□□ -1.28
SMAD3-212ENST00000559937 SLC7A11Q9UPY5 501 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 KLF13Q9Y2Y9 288 aaPredicted RBP7.04□□□□□ -1.28
SMAD3-212ENST00000559937 NOSIPQ9Y314 301 aaKnown RBP7.04□□□□□ -1.28
SMAD3-212ENST00000559937 SESN1Q9Y6P5 492 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 CHD8Q9HCK8 2581 aa7.04□□□□□ -1.28
SMAD3-212ENST00000559937 PMS2P1A4D2B8 440 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A10PA6NDY2 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A18PA6NE21 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A16PA6NEW6 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A20PA6NIJ5 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A8PA6NJQ4 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A7PA6NKC0 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A22PA8MWA6 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A12PA8MX19 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A5PA8MXJ8 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A23PA8MXZ1 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 I3L521 148 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 CDX4O14627 284 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-212ENST00000559937 TPD52L2O43399 206 aaKnown RBP7.03□□□□□ -1.28
SMAD3-212ENST00000559937 CRYZL1O95825 349 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 ACTL6AO96019 429 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 CRHP06850 196 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A15PP0C7V4 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A13PP0C7W8 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A14PP0C7W9 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM90A24PP0C7X0 464 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 TMEM225BP0DP42 221 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 LIPCP11150 499 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 LYL1P12980 280 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 B4GALT1P15291 398 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 AKR1C4P17516 323 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 ZP3P21754 424 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 PSMB6P28072 239 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FAM3AP98173 230 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 HGFACQ04756 655 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 RSU1Q15404 277 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 OR1C1Q15619 314 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 CHRFAM7AQ494W8 412 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 AADACL3Q5VUY0 350 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 RTN4RL2Q86UN3 420 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 DTX1Q86Y01 620 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 SKA3Q8IX90 412 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 PDZD9Q8IXQ8 264 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 SAXO1Q8IYX7 474 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 Q8NFD4 153 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 OR5D18Q8NGL1 313 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 OR10K1Q8NGX5 313 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 AKR7LQ8NHP1 331 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 LRRC20Q8TCA0 184 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 CASTOR1Q8WTX7 329 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 PPP1R1CQ8WVI7 109 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 ST8SIA2Q92186 375 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 TMEM230Q96A57 120 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 WBP1Q96G27 269 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 FER1L6-AS2Q96M78 137 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 RTBDNQ9BSG5 229 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-212ENST00000559937 REG4Q9BYZ8 158 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 DNTTIP1Q9H147 329 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 C5orf66Q9H5L9 145 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 OPA3Q9H6K4 179 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 ELL3Q9HB65 397 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-212ENST00000559937 CHMP1AQ9HD42 196 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-212ENST00000559937 DECR2Q9NUI1 292 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 PLEKHJ1Q9NW61 149 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 RDH8Q9NYR8 311 aa7.03□□□□□ -1.28
SMAD3-212ENST00000559937 C14orf166Q9Y224 244 aaKnown RBP7.03□□□□□ -1.28
SMAD3-212ENST00000559937 LOC100509620A0A075B734 347 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 TEX13DA0A0J9YY54 714 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 A0A1W2PNU3 283 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 RNF222A6NCQ9 220 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 C5orf51A6NDU8 294 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 MFSD2BA6NFX1 497 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 KRBOX1C9JBD0 128 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF587BE7ETH6 402 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 KLRC4-KLRK1H3BQV0 150 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 CCSO14618 274 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 NME2P1O60361 137 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 HTR3BO95264 441 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 CTSDP07339 412 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF806P0C7X5 589 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 PET100P0DJ07 73 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 NME2P22392 152 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 CHATP28329 748 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ARR3P36575 388 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 SERPINF1P36955 418 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 NPY4RP50391 375 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 SUPT4H1P63272 117 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms