RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SSMEM1Q8WWF3 244 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 RORBQ92753 470 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 EME1Q96AY2 570 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 MED30Q96HR3 178 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 OSBPL10Q9BXB5 764 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF696Q9H7X3 374 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 ZNRD1Q9P1U0 126 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 MMP24Q9Y5R2 645 aa14.5□□□□□ -0.09
HDDC3-205ENST00000559898 IGKV1-27A0A075B6S5 117 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 A0A1W2PQ09 198 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 POM121CA8CG34 1229 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 INMTO95050 263 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 PGA5P0DJD9 388 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 ATP6V1B1P15313 513 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 SAA4P35542 130 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 CAV3P56539 151 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF85Q03923 595 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 C11orf91Q3C1V1 193 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 CLVS2Q5SYC1 327 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 METAP1DQ6UB28 335 aaPredicted RBP14.49□□□□□ -0.09
HDDC3-205ENST00000559898 RDH10Q8IZV5 341 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 FAM185AQ8N0U4 392 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 PRSS35Q8N3Z0 413 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 TMEM86BQ8N661 226 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 OR4M1Q8NGD0 313 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 SDSLQ96GA7 329 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 GABARAPL3Q9BY60 117 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 SNX5Q9Y5X3 404 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 POMT1Q9Y6A1 747 aa14.49□□□□□ -0.09
HDDC3-205ENST00000559898 OR5B21A6NL26 309 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 H3BNX3 289 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 NDUFA7O95182 113 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 CCL3L1P16619 93 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 HTR1FP30939 366 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 KIR3DL2P43630 455 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 EGR3Q06889 387 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 UBE2V2Q15819 145 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 TP53I3Q53FA7 332 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 ZBTB37Q5TC79 503 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 OLFML2AQ68BL7 652 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 Q6ZSV7 163 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 RNF144BQ7Z419 303 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 GID4Q8IVV7 300 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 MKXQ8IYA7 352 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 C11orf42Q8N5U0 333 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 OR10H4Q8NGA5 316 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 LINC01006Q8NI28 216 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF671Q8TAW3 534 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 TBC1D15Q8TC07 691 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 CENPNQ96H22 339 aaPredicted RBP14.48□□□□□ -0.09
HDDC3-205ENST00000559898 PRRG3Q9BZD7 231 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 SLITRK2Q9H156 845 aa14.48□□□□□ -0.09
HDDC3-205ENST00000559898 DSCAML1Q8TD84 2053 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 MEIOCA2RUB1 952 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 MEGF11A6BM72 1044 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 J3QT63 122 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 GPR37O15354 613 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 KNG1P01042 644 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 CRYBA1P05813 215 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 CCL1P22362 96 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 PRDX2P32119 198 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 CAPZA1P52907 286 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 ZNF273Q14593 569 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 ZIK1Q3SY52 487 aaPredicted RBP14.47□□□□□ -0.09
HDDC3-205ENST00000559898 DYRK2Q92630 601 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 NRIP2Q9BQI9 281 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 MOB1AQ9H8S9 216 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 HES4Q9HCC6 221 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 IL36RNQ9UBH0 155 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 OR14J1Q9UGF5 321 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 WARS2Q9UGM6 360 aaKnown RBP14.47□□□□□ -0.09
HDDC3-205ENST00000559898 VWFP04275 2813 aa14.47□□□□□ -0.09
HDDC3-205ENST00000559898 FAM230AA0A1W2PPH8 454 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 CLPSL1A2RUU4 121 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 METTL15A6NJ78 407 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 M0R1W7 72 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 DLGAP1O14490 977 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 ERVK11-1P61568 191 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 KPNB1Q14974 876 aaKnown RBP14.46□□□□□ -0.09
HDDC3-205ENST00000559898 TMEM200BQ69YZ2 307 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 TREML4Q6UXN2 200 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 CMTM4Q8IZR5 234 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 OR4F5Q8NH21 305 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 MNTQ99583 582 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 BEX1Q9HBH7 125 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 MTCH1Q9NZJ7 389 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 FAM96BQ9Y3D0 163 aa14.46□□□□□ -0.09
HDDC3-205ENST00000559898 E9PQ18 207 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 NOS1APO75052 506 aaPredicted RBP14.45□□□□□ -0.1
HDDC3-205ENST00000559898 ENTPD6O75354 484 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 ATP5HO75947 161 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 NXPH2O95156 264 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 KRT8P05787 483 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 OR2T7P0C7T2 308 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 CALCBP10092 127 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 PIPP12273 146 aaPredicted RBP14.45□□□□□ -0.1
HDDC3-205ENST00000559898 MPZP25189 248 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 RASSF2P50749 326 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 BMXP51813 675 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 UBE2E1P51965 193 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms