RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ACTA2P62736 377 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ACTG2P63267 376 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 OGFRL1Q5TC84 451 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 CD276Q5ZPR3 534 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 FDX2Q6P4F2 183 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 BRD3OSQ6XYD6 125 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 KCTD20Q7Z5Y7 419 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF573Q86YE8 665 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 DHRSXQ8N5I4 330 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 PACRGLQ8N7B6 248 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 POC1AQ8NBT0 407 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 H1FXQ92522 213 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ITFG2Q969R8 447 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 FGGYQ96C11 551 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 C12orf43Q96C57 262 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 DUX5Q96PT3 197 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 TBX15Q96SF7 602 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF222Q9UK12 451 aa12.27□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 F8VVB4 439 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 F8VWA3 439 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 CASQ2O14958 399 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 TOX4O94842 621 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 GNAO1P09471 354 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 LIMS3P0CW19 117 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 LIMS4P0CW20 117 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 NDUFB7P17568 137 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 FPR2P25090 351 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 ETV1P50549 477 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 GTF2A1P52655 376 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 HILS1P60008 231 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 GABPB1Q06547 395 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 ALKBH1Q13686 389 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 KLHL22Q53GT1 634 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 ATPAF1Q5TC12 328 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 TMEM244Q5VVB8 128 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 TTC23Q5W5X9 447 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 ACP7Q6ZNF0 438 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 RNF144BQ7Z419 303 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 PDZD9Q8IXQ8 264 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 CD177Q8N6Q3 437 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNRF1Q8ND25 227 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 OR13C3Q8NGS6 347 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 SLAMF9Q96A28 289 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 SUCNR1Q9BXA5 334 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 CHST5Q9GZS9 411 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 MS4A7Q9GZW8 240 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 FGF20Q9NP95 211 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 MRPS18AQ9NVS2 196 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 ONECUT1Q9UBC0 465 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 SLC7A11Q9UPY5 501 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 MAB21L2Q9Y586 359 aa12.26□□□□□ -0.45
RABGGTA-211ENST00000559850 IGKV1-9A0A0C4DH69 117 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 ISG15P05161 165 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 ACAA1P09110 424 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 MMP9P14780 707 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF20P17024 532 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 CCR9P51686 369 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 IL13RA1P78552 427 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 LRRC10Q5BKY1 277 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 OR2G6Q5TZ20 316 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 SYS1Q8N2H4 156 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 ZNF676Q8N7Q3 588 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 ZDHHC22Q8N966 263 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 PNLDC1Q8NA58 520 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 TMEM185AQ8NFB2 350 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 WDFY2Q96P53 400 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 NRIP2Q9BQI9 281 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 SIRPDQ9H106 197 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 C8orf4Q9NR00 106 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 INPP5EQ9NRR6 644 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 OR14J1Q9UGF5 321 aa12.25□□□□□ -0.45
RABGGTA-211ENST00000559850 RFPL4AA6NLU0 287 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 RFPL4AL1F8VTS6 287 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 SIGLEC5O15389 551 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 GATBO75879 557 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 NXPH2O95156 264 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 ZFPL1O95159 310 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 SERPINA3P01011 423 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 CALCBP10092 127 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 ATF1P18846 271 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 MPZP25189 248 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 CAPGP40121 348 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 FUT6P51993 359 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 CAPZA1P52907 286 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 GBX2P52951 348 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 CNN3Q15417 329 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 METTL11BQ5VVY1 283 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 XAF1Q6GPH4 301 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 LAIR2Q6ISS4 152 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 SLC25A26Q70HW3 274 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 SPATA3Q8NHX4 192 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 NRG4Q8WWG1 115 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms