RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PSMB6P28072 239 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 AKR1C3P42330 323 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 PCK2Q16822 640 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 RNF212Q495C1 297 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 DRAM2Q6UX65 266 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 NKAIN3Q8N8D7 197 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 OR4D10Q8NGI6 311 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 TIMD4Q96H15 378 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 GMPPAQ96IJ6 420 aaPredicted RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 SYT3Q9BQG1 590 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 HINT2Q9BX68 163 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 EHFQ9NZC4 300 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 FAM208BQ5VWN6 2430 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 LOC102723996A0A087X1L8 192 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 NME2P1O60361 137 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 MPGP29372 298 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 TCF15Q12870 199 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 RNLSQ5VYX0 342 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 TSEN54Q7Z6J9 526 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 CPEB3Q8NE35 698 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 PURGQ9UJV8 347 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 KPTNQ9Y664 436 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 TMEM235A6NFC5 223 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 GPR31O00270 319 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 PPP1R2P9O14990 202 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 BCL2L11O43521 198 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 EPPINO95925 133 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 CELA3AP09093 270 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 NDUFB7P17568 137 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 KLRB1Q12918 225 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 ZNF273Q14593 569 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 FAM214BQ7L5A3 538 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 MUC20Q8N307 709 aaPredicted RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 OR5T1Q8NG75 326 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 BOD1Q96IK1 185 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 TAF9BQ9HBM6 251 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 GNG12Q9UBI6 72 aa9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 LSM2Q9Y333 95 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-202ENST00000559694 LTBP2Q14767 1821 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 UPK3AO75631 287 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 ACTL6BO94805 426 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 PMP2P02689 132 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 NPY4RP50391 375 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 HIKESHIQ53FT3 197 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 OR2W3Q7Z3T1 314 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 DPPA2Q7Z7J5 298 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 BMPERQ8N8U9 685 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 HGDQ93099 445 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 PELI1Q96FA3 418 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 URGCP-MRPS24S4R325 110 aa9.4□□□□□ -0.91
CARMIL3-202ENST00000559694 CENPFP49454 3210 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 C16orf97H3BN30 126 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 H7C1Q1 480 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 SERPINF1P36955 418 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 IAH1Q2TAA2 248 aaPredicted RBP9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 C1orf185Q5T7R7 199 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 SLC25A26Q70HW3 274 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 BHLHA15Q7RTS1 189 aaPredicted RBP9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 GPR35Q9HC97 309 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 SLC7A10Q9NS82 523 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 TMEM100Q9NV29 134 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 POLDIP2Q9Y2S7 368 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 SMCO3A2RU48 225 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 NUDT19A8MXV4 375 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 HS3ST1O14792 307 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 NAT2P11245 290 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ALOX5APP20292 161 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 HAAOP46952 286 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 MEX3BQ6ZN04 569 aaKnown RBP9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF561Q8N587 486 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 OR11H4Q8NGC9 324 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 NPAS1Q99742 590 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ABCA4P78363 2273 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ACACBO00763 2458 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 DSPPQ9NZW4 1301 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNHIT1O43257 154 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 TNFSF12O43508 249 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 OR13C7P0DN81 318 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 BATFQ16520 125 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF626Q68DY1 528 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ADGRE4PQ86SQ3 457 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF573Q86YE8 665 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ZDHHC23Q8IYP9 409 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 FBXL14Q8N1E6 418 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 RDH5Q92781 318 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms