RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 UGT2A1Q9Y4X1 527 aa13.39□□□□□ -0.27
CDC42BPB-203ENST00000558867 KIR2DS1A0A191URI9 304 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 ARL6IP5O75915 188 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 NDUFA7O95182 113 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 UCHL1P09936 223 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 COX5BP10606 129 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 KITLGP21583 273 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 SDC2P34741 201 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 RPS11P62280 158 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 LSM6P62312 80 aaKnown RBP13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 ZNF774Q6NX45 483 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 FIP1L1Q6UN15 594 aaKnown RBP13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 C1orf87Q8N0U7 546 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR8B3Q8NGG8 313 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 AP3S1Q92572 193 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR2V2Q96R30 315 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR8B2Q96RD0 313 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 ABHD6Q9BV23 337 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 MROQ9BYG7 248 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 BARHL1Q9BZE3 327 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 PRDM13Q9H4Q3 707 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
CDC42BPB-203ENST00000558867 CMYA5Q8N3K9 4069 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 TMEM212A6NML5 194 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 SPARCP09486 303 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 MSR1P21757 451 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 S100A5P33763 92 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 SRP9P49458 86 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 RIDAP52758 137 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 NANOS3P60323 173 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 SCRN3Q0VDG4 424 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 EIF2B1Q14232 305 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 MEP1BQ16820 701 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR2G2Q8NGZ5 317 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 RNF133Q8WVZ7 376 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 TAF15Q92804 592 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 CMBLQ96DG6 245 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 AMELYQ99218 206 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 NUDT16L1Q9BRJ7 211 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 TNFRSF19Q9NS68 423 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 CLN8Q9UBY8 286 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 POMT1Q9Y6A1 747 aa13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 PRKDCP78527 4128 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-203ENST00000558867 WNK1Q9H4A3 2382 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 TRBV5-5A0A0J9YX44 114 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 A0A1W2PPL8 197 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR4C45A6NMZ5 311 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 MAGEB4O15481 346 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 SRSF10O75494 262 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 MAPK3P27361 379 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 CD40LGP29965 261 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 MMP16P51512 607 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 ZNF45Q02386 682 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 PAX2Q02962 417 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 HLXQ14774 488 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 Q6YL49 198 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR5L1Q8NGL2 311 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR13G1Q8NGZ3 307 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 ACOT12Q8WYK0 555 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 KCTD12Q96CX2 325 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 HAVCR1Q96D42 359 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 TTTY10Q9BZA0 68 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 ZCCHC4Q9H5U6 513 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 NIPAL2Q9H841 368 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 TMEM165Q9HC07 324 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 SMURF1Q9HCE7 757 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 C1RLQ9NZP8 487 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 FRRS1LQ9P0K9 344 aa13.36□□□□□ -0.27
CDC42BPB-203ENST00000558867 MDFIC2A0A1B0GVS7 189 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 ZNF879B4DU55 563 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 ZFPL1O95159 310 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 FSTL3O95633 263 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 IRF2P14316 349 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 RAC2P15153 192 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 MYL9P24844 172 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 PSMB10P40306 273 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 HTR5AP47898 357 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 PITPNBP48739 271 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 SRSF4Q08170 494 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 TAF9Q16594 264 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 Q6ZR03 302 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 KRT77Q7Z794 578 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 OR5AK2Q8NH90 309 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 C6orf62Q9GZU0 229 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 COMMD4Q9H0A8 199 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 RNF114Q9Y508 228 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 LRP12Q9Y561 859 aa13.35□□□□□ -0.27
CDC42BPB-203ENST00000558867 J3QW42 95 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms