RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 NKIRAS2Q9NYR9 191 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF629Q9UEG4 869 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-207ENST00000558763 MEMO1Q9Y316 297 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
SMAD3-207ENST00000558763 A0A0G2JNJ9 132 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CCL21O00585 134 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CST4P01036 141 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 GNLYP22749 145 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 RCVRNP35243 200 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 FUT6P51993 359 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 PLCXD3Q63HM9 321 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 SIGIRRQ6IA17 410 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 C1orf162Q8NEQ5 155 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 OR8S1Q8NH09 359 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 PIGCQ92535 297 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 SNAPC3Q92966 411 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 TECTBQ96PL2 329 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 VKORC1Q9BQB6 163 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 URM1Q9BTM9 101 aaKnown RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF581Q9P0T4 197 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 Q9UFV3 132 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 A0A1B0GUH1 482 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 PQLC2LA1A4F0 135 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 PYCARD-AS1I3L0S3 204 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 M0QYG6 137 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 MSTNO14793 375 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CYB5AP00167 134 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 IGKV3-15P01624 115 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 TMEM225BP0DP42 221 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 FAUP35544 74 aaKnown RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CD83Q01151 205 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 FCN2Q15485 313 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 MOB3CQ70IA8 216 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 MRPL21Q7Z2W9 205 aaKnown RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CCDC36Q8IYA8 594 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 OR11H7Q8NGC8 314 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 DMRTA2Q96SC8 542 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 OPN3Q9H1Y3 402 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-207ENST00000558763 OR51J1Q9H342 316 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 BEX1Q9HBH7 125 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 IL36GQ9NZH8 169 aa11.12□□□□□ -0.63
SMAD3-207ENST00000558763 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 RAB3DO95716 219 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 PLATP00750 562 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 SFTPBP07988 381 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 NAT1P18440 290 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 BMP5P22003 454 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 RAD52P43351 418 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 IDH3GP51553 393 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-207ENST00000558763 MALLQ13021 153 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 PRDX4Q13162 271 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 OR52W1Q6IF63 320 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 TCTE3Q8IZS6 198 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF610Q8N9Z0 462 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 GALNT11Q8NCW6 608 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 PXT1Q8NFP0 134 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 STEAP2Q8NFT2 490 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 OR51T1Q8NGJ9 327 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 MRGPRFQ96AM1 343 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 DMRTB1Q96MA1 342 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
SMAD3-207ENST00000558763 OPA3Q9H6K4 179 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 PROCRQ9UNN8 238 aa11.11□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF736B4DX44 427 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 J3QW42 95 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 SMPD2O60906 423 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 CRHP06850 196 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 VSIG10L2P0DP72 767 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 CPT2P23786 658 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 MPZP25189 248 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 PNLIPRP3Q17RR3 467 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 ZNF782Q6ZMW2 699 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 SLC36A1Q7Z2H8 476 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 OR13C8Q8NGS7 320 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 RND1Q92730 232 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 CPNE2Q96FN4 548 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 SLC6A7Q99884 636 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 SFXN3Q9BWM7 321 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 PECRQ9BY49 303 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 SLC7A11Q9UPY5 501 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 CXCL3P19876 107 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 ATP1B3P54709 279 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 UBE2NP61088 152 aaKnown RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 TBC1D28Q2M2D7 210 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 CD276Q5ZPR3 534 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 TMEM211Q6ICI0 200 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 FBXW12Q6X9E4 464 aa11.1□□□□□ -0.63
SMAD3-207ENST00000558763 GLDNQ6ZMI3 551 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-207ENST00000558763 CXorf67Q86X51 503 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms