RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OR5V1Q9UGF6 321 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 POLDIP2Q9Y2S7 368 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 TPRKBQ9Y3C4 175 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 SIRT4Q9Y6E7 314 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-205ENST00000558428 IGKV1-9A0A0C4DH69 117 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 A0A0G2JMP0 313 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 A0A0X1KG70 313 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 PNMA8CA0A1B0GUJ8 204 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 KIAA1324LA8MWY0 1029 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 TNFRSF13BO14836 293 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 TMPRSS2O15393 492 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 SYNGR1O43759 233 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 PRKACBP22694 351 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 AZGP1P25311 298 aaKnown RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 SOX2P48431 317 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 WNT4P56705 351 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 TAS2R43P59537 309 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 WDR25Q64LD2 544 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 CALHM1Q8IU99 346 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 NANOGP1Q8N7R0 232 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 POC1AQ8NBT0 407 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 OR4M2Q8NGB6 313 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 OR5T2Q8NGG2 359 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 OR13C9Q8NGT0 318 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 GPR148Q8TDV2 347 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 RGP1Q92546 391 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 SGCDQ92629 289 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 TMIGD2Q96BF3 282 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 C12orf43Q96C57 262 aaKnown RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF488Q96MN9 340 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF184Q99676 751 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 PAK1IP1Q9NWT1 392 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 NLKQ9UBE8 527 aa10.3□□□□□ -0.76
SMAD3-205ENST00000558428 POLR3KQ9Y2Y1 108 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-205ENST00000558428 IGKV1-27A0A075B6S5 117 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 PPIAL4CA0A0B4J2A2 164 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 TRAPPC2LH3BP13 241 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 PLATP00750 562 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 PGA5P0DJD9 388 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 GATA3P23771 443 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 CRHBPP24387 322 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 MPZP25189 248 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 RBP2P50120 134 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 NPY4RP50391 375 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 ATP1B3P54709 279 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 SLC35A2P78381 396 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 RNLSQ5VYX0 342 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 STUMQ69YW2 141 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 DMKNQ6E0U4 476 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF841Q6ZN19 808 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 LHFPL2Q6ZUX7 228 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 SLC36A1Q7Z2H8 476 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 SERPINA12Q8IW75 414 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 BATF2Q8N1L9 274 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 DNAAF1Q8NEP3 725 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 OR5D14Q8NGL3 314 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 GHSRQ92847 366 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 SPSB1Q96BD6 273 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 OPALINQ96PE5 141 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 CCL13Q99616 98 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 MND1Q9BWT6 205 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 CDCA4Q9BXL8 241 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 PKIBQ9C010 78 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 Q9H521 79 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 ZCCHC4Q9H5U6 513 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 NEK6Q9HC98 313 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 MMP26Q9NRE1 261 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 KAAG1Q9UBP8 84 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF281Q9Y2X9 895 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 PCDHGB5Q9Y5G0 923 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 CUBNO60494 3623 aa10.29□□□□□ -0.76
SMAD3-205ENST00000558428 A0A1B0GW55 424 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 NKX6-3A6NJ46 265 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 OR2AT4A6NND4 320 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 J3QLI3 93 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 RGS10O43665 173 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 RRP9O43818 475 aaKnown RBP10.28□□□□□ -0.76
SMAD3-205ENST00000558428 NOS1APO75052 506 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-205ENST00000558428 INMTO95050 263 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 NXPH2O95156 264 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 CD2P06729 351 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L2P0CJ85 424 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L3P0CJ86 424 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L4P0CJ87 422 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L5P0CJ88 424 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L6P0CJ89 424 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L7P0CJ90 424 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 SRD5A1P18405 259 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 SRP14P37108 136 aaKnown RBP10.28□□□□□ -0.76
SMAD3-205ENST00000558428 GABRA2P47869 451 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 POU3F4P49335 361 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 MTCP1P56278 107 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 IL24Q13007 206 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 SMIM21Q3B7S5 101 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 RBM48Q5RL73 367 aaKnown RBP10.28□□□□□ -0.76
SMAD3-205ENST00000558428 DUX4L9Q6RFH8 374 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-205ENST00000558428 ACP7Q6ZNF0 438 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 FAM216BQ8N7L0 139 aa10.28□□□□□ -0.76
SMAD3-205ENST00000558428 OR13C5Q8NGS8 318 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms