RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 LRFN1Q9P244 771 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 DNAJB11Q9UBS4 358 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 MCTS1Q9ULC4 181 aaKnown RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 C14orf166Q9Y224 244 aaKnown RBP7.26□□□□□ -1.25
SPG11-209ENST00000558253 LAMA3Q16787 3333 aa7.26□□□□□ -1.25
SPG11-209ENST00000558253 ASXL3Q9C0F0 2248 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 KIF26BQ2KJY2 2108 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 ZNF816-ZNF321PA0A0X1KG74 233 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 MFSD2BA6NFX1 497 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 OR2AT4A6NND4 320 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 STMND1H3BQB6 276 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 TAAR5O14804 337 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 CXCL13O43927 109 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 MRPL33O75394 65 aaKnown RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 ACTL6AO96019 429 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 NRASP01111 189 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 PDGFBP01127 241 aaPredicted RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 LCATP04180 440 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 CSN2P05814 226 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 NMBP08949 121 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 HOXD4P09016 255 aaPredicted RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 SP9P0CG40 484 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 LYL1P12980 280 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 FAHP16930 419 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 AKR1C4P17516 323 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 VAMP1P23763 118 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 CD82P27701 267 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 ARR3P36575 388 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 HTR5AP47898 357 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 STARP49675 285 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 FOXO1Q12778 655 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 RNPS1Q15287 305 aaKnown RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 OR8B8Q15620 311 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 PXDC1Q5TGL8 231 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 SHEQ5VZ18 495 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 ZNF660Q6AZW8 331 aaPredicted RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 OR52W1Q6IF63 320 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 YRDCQ86U90 279 aaKnown RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 OR2M7Q8NG81 312 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 STOML3Q8TAV4 291 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 MARCH1Q8TCQ1 289 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 PPP1R1CQ8WVI7 109 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 MRGPRFQ96AM1 343 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 PIK3IP1Q96FE7 263 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 BORCS8Q96FH0 119 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 THOC3Q96J01 351 aaKnown RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 C2orf50Q96LR7 162 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 NICN1Q9BSH3 213 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 C1QTNF5Q9BXJ0 243 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 BANF2Q9H503 90 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 LDAHQ9H6V9 325 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 BCO1Q9HAY6 547 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 RHOFQ9HBH0 211 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 NECAP2Q9NVZ3 263 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 OSGIN2Q9Y236 505 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 KLF13Q9Y2Y9 288 aaPredicted RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 NOSIPQ9Y314 301 aaKnown RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 KLF2Q9Y5W3 355 aaPredicted RBP7.25□□□□□ -1.25
SPG11-209ENST00000558253 XIRP2A4UGR9 3374 aa7.25□□□□□ -1.25
SPG11-209ENST00000558253 FREM3P0C091 2139 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 PCNX3Q9H6A9 2034 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 IGHV3-15A0A0B4J1V0 119 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 RNF222A6NCQ9 220 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 C5orf51A6NDU8 294 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 A8MXK9 166 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 G3V3Y1 287 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 KLRC4-KLRK1H3BQV0 150 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 TEX46H3BTG2 121 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 M0R296 226 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 IFNA21P01568 189 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 CRHP06850 196 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 CTSDP07339 412 aaPredicted RBP7.24□□□□□ -1.25
SPG11-209ENST00000558253 ZNF32P17041 273 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 KLK2P20151 261 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 DLSTP36957 453 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 CLDN15P56746 228 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 PSG4Q00888 419 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 MALLQ13021 153 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 WIPI1Q5MNZ9 446 aaPredicted RBP7.24□□□□□ -1.25
SPG11-209ENST00000558253 TMEM211Q6ICI0 200 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 UQCC3Q6UW78 93 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 DHRS11Q6UWP2 260 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 COLCA1Q6ZS62 124 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 TIPARPQ7Z3E1 657 aaKnown RBP7.24□□□□□ -1.25
SPG11-209ENST00000558253 STPG2Q8N412 459 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 Q8NFD4 153 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 ST8SIA2Q92186 375 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 PSMF1Q92530 271 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 CCDC120Q96HB5 630 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 SPACA5Q96QH8 159 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 ST6GALNAC5Q9BVH7 336 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 C5orf66Q9H5L9 145 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 ELL3Q9HB65 397 aaPredicted RBP7.24□□□□□ -1.25
SPG11-209ENST00000558253 CHMP1AQ9HD42 196 aaPredicted RBP7.24□□□□□ -1.25
SPG11-209ENST00000558253 C1orf123Q9NWV4 160 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 SDHAF2Q9NX18 166 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 RASL12Q9NYN1 266 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 EHFQ9NZC4 300 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms