RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ORC2Q13416 577 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 KIAA0087Q14695 138 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 OR7A5Q15622 319 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CT45A1Q5HYN5 189 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CCNJQ5T5M9 372 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 RNLSQ5VYX0 342 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 PDPK2PQ6A1A2 396 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 PRMT9Q6P2P2 845 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 ERICH5Q6P6B1 374 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 RFLNAQ6ZTI6 216 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 LINC00336Q6ZUF6 198 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 TMEM179BQ7Z7N9 219 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 TMEM61Q8N0U2 210 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 VKORC1L1Q8N0U8 176 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 ZFP41Q8N8Y5 198 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CT45A3Q8NHU0 189 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 PHF10Q8WUB8 498 aaKnown RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 C1orf147Q96MC9 270 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 NAPGQ99747 312 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 SH3GL3Q99963 347 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 NICN1Q9BSH3 213 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 MAP1LC3CQ9BXW4 147 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 ANKHQ9HCJ1 492 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CSNK1G1Q9HCP0 422 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CTSFQ9UBX1 484 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 ZNF282Q9UDV7 671 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 SHPKQ9UHJ6 478 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 ST3GAL6Q9Y274 331 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 VSIG4Q9Y279 399 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 GOLGA8QA0A0J9YX86 632 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 C10orf142B7Z368 130 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 K7EMT4 169 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 UBFD1O14562 309 aaKnown RBP3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 SRP72O76094 671 aaKnown RBP3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 OXTP01178 125 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 THY1P04216 161 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 CISD3P0C7P0 127 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 HPGDP15428 266 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 CR1P17927 2039 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 PSMB1P20618 241 aaKnown RBP3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 AK4P27144 223 aaPredicted RBP3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 HTR2CP28335 458 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 SHC1P29353 583 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 CSNK1DP48730 415 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 MEOX2P50222 304 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 PRPS1P60891 318 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 VAMP3Q15836 100 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 NRF1Q16656 503 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 ZSCAN26Q16670 478 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 KYAT1Q16773 422 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 C18orf21Q32NC0 220 aaPredicted RBP3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 ZBED5Q49AG3 693 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 TPTE2P1Q5T6R2 138 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 PEX26Q7Z412 305 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 PNKDQ8N490 385 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 ZNF525Q8N782 197 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 OR4F15Q8NGB8 312 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 OR1N2Q8NGR9 330 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 MUC7Q8TAX7 377 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 MARC2Q969Z3 335 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 OTUB2Q96DC9 234 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 MICU1Q9BPX6 476 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 BBS2Q9BXC9 721 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 DEFB126Q9BYW3 111 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 ULBP3Q9BZM4 244 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 DEFB127Q9H1M4 99 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 NRBP2Q9NSY0 501 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 Q9UF83 564 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 UBIAD1Q9Y5Z9 338 aa3.57□□□□□ -1.84
MTHFD1-216ENST00000557539 DOCK10Q96BY6 2186 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 SCN2AQ99250 2005 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 IGKV3D-15A0A087WSY6 115 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 A0A1W2PQ72 361 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 H0YHG0 523 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 H3BN98 237 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 SMC2O95347 1197 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 UTS2O95399 124 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 GIPP09681 153 aaPredicted RBP3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 ICAM2P13598 275 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 GGT1P19440 569 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 IVDP26440 423 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 NUDT1P36639 197 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 CSNK1A1P48729 337 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 RND2P52198 227 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 RPS21P63220 83 aaKnown RBP3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 MXD1Q05195 221 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 REG3AQ06141 175 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 ITGB3BPQ13352 177 aaPredicted RBP3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 NSDHLQ15738 373 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 SLC1A5Q15758 541 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 USF2Q15853 346 aaPredicted RBP3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 C5orf64Q2M2E5 130 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 SPECC1LQ69YQ0 1117 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 WDR59Q6PJI9 974 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
MTHFD1-216ENST00000557539 NOXO1Q8NFA2 376 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms