RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PRRC1Q96M27 445 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 OR7D2Q96RA2 312 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 SDF2Q99470 211 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PITX2Q99697 317 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ARHGDIGQ99819 225 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 NICN1Q9BSH3 213 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 GABARAPL3Q9BY60 117 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 SLC38A1Q9H2H9 487 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 OR51I1Q9H343 314 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ARMC7Q9H6L4 198 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PTGES2Q9H7Z7 377 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 REEP1Q9H902 201 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 C12orf10Q9HB07 376 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 LPAR2Q9HBW0 351 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 TMEM9BQ9NQ34 198 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 PRTFDC1Q9NRG1 225 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 C1orf123Q9NWV4 160 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 KLHL28Q9NXS3 571 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 SEC14L3Q9UDX4 400 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 EXOSC1Q9Y3B2 195 aaKnown RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 WDR45Q9Y484 360 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 ENPP4Q9Y6X5 453 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 RP1L1Q8IWN7 2480 aaPredicted RBP2.37□□□□□ -2.03
VRK1-207ENST00000557352 PCNX1Q96RV3 2341 aa2.37□□□□□ -2.03
VRK1-207ENST00000557352 CACNA1AO00555 2505 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 WDFY3Q8IZQ1 3526 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 FAM230AA0A1W2PPH8 454 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF860A6NHJ4 632 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR6C70A6NIJ9 312 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 SAGE2PA6NJ88 616 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ANKRD30BLA7E2S9 258 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 IDSB3KWA1 339 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 C21orf140B9A014 251 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 H0YL77 283 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 FFAR1O14842 300 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 MPZL2O60487 215 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 DNAJB6O75190 326 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 UGT2B11O75310 529 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 BCAS1O75363 584 aaPredicted RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF254O75437 659 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 SCRG1O75711 98 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 UGT2B17O75795 530 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 KCNK2O95069 426 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR5F1O95221 314 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 TNFAIP8O95379 198 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 H6PDO95479 791 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 EPPINO95925 133 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 C1QCP02747 245 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 KLK3P07288 261 aaPredicted RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 CT62P0C5K7 136 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR12D1P0DN82 309 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF44P15621 663 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 GSTM3P21266 225 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 CSRP1P21291 193 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 NT5EP21589 574 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 IFNA8P32881 189 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 RPL4P36578 427 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 IFNGR2P38484 337 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 RBM34P42696 430 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 NUP107P57740 925 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 GABARAPL2P60520 117 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ESRRGP62508 458 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 MERTKQ12866 999 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 DAZ2Q13117 558 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 EBPQ15125 230 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 INAQ16352 499 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 SYPL1Q16563 259 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 DUSP7Q16829 419 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ANKDD1AQ495B1 522 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 KCTD21Q4G0X4 260 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 TRMT12Q53H54 448 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR2B11Q5JQS5 317 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 LPCAT4Q643R3 524 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 CYB5R2Q6BCY4 276 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 RPL13AP3Q6NVV1 102 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 C1orf94Q6P1W5 598 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 UGT2A3Q6UWM9 527 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 C5orf46Q6UWT4 87 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ANGPTL8Q6UXH0 198 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 COX15Q7KZN9 410 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF550Q7Z398 422 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 C16orf62Q7Z3J2 963 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 VTCN1Q7Z7D3 282 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 MISPQ8IVT2 679 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF786Q8N393 782 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 DHRSXQ8N5I4 330 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 COX18Q8N8Q8 333 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 APCDD1LQ8NCL9 501 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 B3GNT7Q8NFL0 401 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR52R1Q8NGF1 315 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR5D16Q8NGK9 328 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 OR2Y1Q8NGV0 311 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 UCN3Q969E3 161 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 SLC25A36Q96CQ1 311 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 COL21A1Q96P44 957 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 IP6K3Q96PC2 410 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 SECISBP2Q96T21 854 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms