RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 POC1AQ8NBT0 407 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 DNAAF1Q8NEP3 725 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 TRMT10AQ8TBZ6 339 aaKnown RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 GGHQ92820 318 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 FGGYQ96C11 551 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 BORCS8Q96FH0 119 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 MED30Q96HR3 178 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF184Q99676 751 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 NUDT16L1Q9BRJ7 211 aaKnown RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 NEK6Q9HC98 313 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 NLKQ9UBE8 527 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 ANK3Q12955 4377 aaKnown RBP10.38□□□□□ -0.75
SLIRP-209ENST00000557342 KIR2DS1A0A191URI9 304 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 OR2AT4A6NND4 320 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 E9PI62 339 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 DVL1O14640 695 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 ACAA1P09110 424 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-209ENST00000557342 OCM2P0CE71 109 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 OCMP0CE72 109 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-209ENST00000557342 PGA5P0DJD9 388 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 PPIAL4GP0DN37 164 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 PRKACBP22694 351 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 MPZP25189 248 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 AQP4P55087 323 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 ST3GAL4Q11206 333 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 IL24Q13007 206 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 SMIM21Q3B7S5 101 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 LRRC10Q5BKY1 277 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 STX19Q8N4C7 294 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 PNLDC1Q8NA58 520 aaKnown RBP10.38□□□□□ -0.75
SLIRP-209ENST00000557342 BPIFB6Q8NFQ5 453 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 OR52N1Q8NH53 320 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 NPRL2Q8WTW4 380 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 SPSB1Q96BD6 273 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 SEH1LQ96EE3 360 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 ADAT3Q96EY9 351 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-209ENST00000557342 CCL13Q99616 98 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 SNTG1Q9NSN8 517 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 BABAM2Q9NXR7 383 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 OPN4Q9UHM6 478 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 PSORS1C1Q9UIG5 152 aa10.38□□□□□ -0.75
SLIRP-209ENST00000557342 NF1P21359 2839 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 SYNGR1O43759 233 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ZFPL1O95159 310 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ATF1P18846 271 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 EPHA1P21709 976 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 RBP2P50120 134 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ATP1B3P54709 279 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 IL13RA1P78552 427 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 CDK5R1Q15078 307 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ARMCX4Q5H9R4 360 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 OR2G6Q5TZ20 316 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ACP7Q6ZNF0 438 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF788Q6ZQV5 615 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 LHFPL2Q6ZUX7 228 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 SERPINA12Q8IW75 414 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 OR5T2Q8NGG2 359 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 OR51A4Q8NGJ6 313 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ANGPTL6Q8NI99 470 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 TSEN15Q8WW01 171 aaKnown RBP10.37□□□□□ -0.75
SLIRP-209ENST00000557342 ST8SIA4Q92187 359 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 DACT3Q96B18 629 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-209ENST00000557342 DMRTB1Q96MA1 342 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 PDCD1LG2Q9BQ51 273 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 SMURF1Q9HCE7 757 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 SCN3BQ9NY72 215 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 DHDHQ9UQ10 334 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 NAV3Q8IVL0 2385 aa10.37□□□□□ -0.75
SLIRP-209ENST00000557342 C22orf46C9J442 243 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 SIGLEC5O15389 551 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 OGG1O15527 345 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 XPNPEP2O43895 674 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 ALX3O95076 343 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 NXPH2O95156 264 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 CYB5AP00167 134 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 MT-ND2P03891 347 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 PSG2P11465 335 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 ADRA2CP18825 462 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 FPR2P25090 351 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 AZGP1P25311 298 aaKnown RBP10.36□□□□□ -0.75
SLIRP-209ENST00000557342 GABRA2P47869 451 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 GTF2A1P52655 376 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-209ENST00000557342 MTCP1P56278 107 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 TAS2R43P59537 309 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 IKZF1Q13422 519 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 C6orf141Q5SZD1 244 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 LAIR2Q6ISS4 152 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 AHSA2Q719I0 299 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 BTN2A1Q7KYR7 527 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 ANGPTL5Q86XS5 388 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 CALHM1Q8IU99 346 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 MKXQ8IYA7 352 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 PARP16Q8N5Y8 322 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 FAM216BQ8N7L0 139 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 OR5D14Q8NGL3 314 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 OR10AC1Q8NH08 325 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 RPS4Y2Q8TD47 263 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 GPR148Q8TDV2 347 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 GATAD2BQ8WXI9 593 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms