RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GDNFP39905 211 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 CDKN2AP42771 156 aaKnown RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 VAMP3Q15836 100 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 RTL6Q6ICC9 239 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ADAM5Q6NVV9 412 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 GUSBP11Q6P575 273 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ARL9Q6T311 187 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SHISA6Q6ZSJ9 500 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF440Q8IYI8 595 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 APCDD1LQ8NCL9 501 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 DIRAS2Q96HU8 199 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 Q96M85 177 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 LPAR4Q99677 370 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 NDC1Q9BTX1 674 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 B3GAT2Q9NPZ5 323 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SMCO4Q9NRQ5 59 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SIT1Q9Y3P8 196 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 IGLV3-12A0A075B6K2 115 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 A0A087WV48 116 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 H3BML4 177 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 J3QLW9 94 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ACTL6BO94805 426 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 HLA-DQB1P01920 261 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 HOXB5P09067 269 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 IRF2P14316 349 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF19P17023 458 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 SHC1P29353 583 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 OTX1P32242 354 aaPredicted RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 PYCR1P32322 319 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CEACAM6P40199 344 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TNFSF10P50591 281 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 RAB7AP51149 207 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 OR10A3P58181 314 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TP53I3Q53FA7 332 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 PDZD11Q5EBL8 140 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 C1QL3Q5VWW1 255 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 DHRS7BQ6IAN0 325 aaPredicted RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 RHBDD2Q6NTF9 364 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 FAM198BQ6UWH4 519 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 DRAM2Q6UX65 266 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 FAM131AQ6UXB0 335 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 GPR135Q8IZ08 494 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 C17orf78Q8N4C9 275 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ADAMTS17Q8TE56 1095 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TSSK2Q96PF2 358 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ALG12Q9BV10 488 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CFAP47Q6ZTR5 3102 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 IGHV3-20A0A0C4DH32 117 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 PLA2G10O15496 165 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 OR7C2O60412 319 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TDGF1P13385 188 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ITPKBP27987 946 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CHRNB4P30926 498 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 MTNR1BP49286 362 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 SRSF2Q01130 221 aaKnown RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 RPL18Q07020 188 aaKnown RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ELOA3BQ3SY89 546 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 MESTQ5EB52 335 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF684Q5T5D7 378 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 PHF19Q5T6S3 580 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CNIH2Q6PI25 160 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ALKAL2Q6UX46 152 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 C16orf47Q6ZP98 133 aaPredicted RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CPEB2Q7Z5Q1 589 aaKnown RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 MARCH3Q86UD3 253 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 COMMD2Q86X83 199 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 LDLRAD3Q86YD5 345 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM185AQ8NFB2 350 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ELOA3Q8NG57 546 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 OR10G3Q8NGC4 313 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 RPS4Y2Q8TD47 263 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 SAP25Q8TEE9 199 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 SLC39A7Q92504 469 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 GHSRQ92847 366 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 RBP7Q96R05 134 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 FAAP24Q9BTP7 215 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 LAT2Q9GZY6 243 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 G6PC2Q9NQR9 355 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 PLEKHJ1Q9NW61 149 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 COPS7AQ9UBW8 275 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1W2PQD3 144 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 IDSB3KWA1 339 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 BLOC1S5-TXNDC5H3BN57 136 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 OR2T1O43869 369 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 NPIPB7O75200 414 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CDS2O95674 445 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 HPP00738 406 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 FGF2P09038 288 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 DUSP1P28562 367 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 RPL4P36578 427 aaKnown RBP4.5□□□□□ -1.69
TMEM260-210ENST00000556422 CDK5R1Q15078 307 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TPTE2P1Q5T6R2 138 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 H3F3CQ6NXT2 135 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF585AQ6P3V2 769 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM205Q6UW68 189 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 SYS1Q8N2H4 156 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 PLPP5Q8NEB5 264 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 OR2T27Q8NH04 317 aa4.5□□□□□ -1.69
TMEM260-210ENST00000556422 ABHD4Q8TB40 342 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms