RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 IGHV3-9P01782 118 aa15.07■□□□□ 0
SHOX-204ENST00000554971 RRASP10301 218 aa15.07■□□□□ 0
SHOX-204ENST00000554971 HLA-GP17693 338 aa15.07■□□□□ 0
SHOX-204ENST00000554971 GRNP28799 593 aaKnown RBP15.07■□□□□ 0
SHOX-204ENST00000554971 ZNF93P35789 620 aaPredicted RBP15.07■□□□□ 0
SHOX-204ENST00000554971 OR3A2P47893 321 aa15.07■□□□□ 0
SHOX-204ENST00000554971 CDNFQ49AH0 187 aa15.07■□□□□ 0
SHOX-204ENST00000554971 RNASE10Q5GAN6 216 aaKnown RBP15.07■□□□□ 0
SHOX-204ENST00000554971 CFAP77Q6ZQR2 320 aa15.07■□□□□ 0
SHOX-204ENST00000554971 OR52N4Q8NGI2 321 aa15.07■□□□□ 0
SHOX-204ENST00000554971 GHRLQ9UBU3 117 aa15.07■□□□□ 0
SHOX-204ENST00000554971 PRSS50Q9UI38 385 aa15.07■□□□□ 0
SHOX-204ENST00000554971 RTTNQ86VV8 2226 aa15.07■□□□□ 0
SHOX-204ENST00000554971 RFPL4AA6NLU0 287 aa15.06■□□□□ 0
SHOX-204ENST00000554971 RFPL4AL1F8VTS6 287 aa15.06■□□□□ 0
SHOX-204ENST00000554971 GOSR2O14653 212 aa15.06■□□□□ 0
SHOX-204ENST00000554971 B3GALNT1O75752 331 aa15.06■□□□□ 0
SHOX-204ENST00000554971 GSTP1P09211 210 aaKnown RBP15.06■□□□□ 0
SHOX-204ENST00000554971 QDPRP09417 244 aa15.06■□□□□ 0
SHOX-204ENST00000554971 VSIG8P0DPA2 414 aa15.06■□□□□ 0
SHOX-204ENST00000554971 RPA2P15927 270 aa15.06■□□□□ 0
SHOX-204ENST00000554971 PPP3CBP16298 524 aa15.06■□□□□ 0
SHOX-204ENST00000554971 C10orf128Q5T292 105 aa15.06■□□□□ 0
SHOX-204ENST00000554971 TMEM65Q6PI78 240 aa15.06■□□□□ 0
SHOX-204ENST00000554971 FOXL2NBQ6ZUU3 175 aa15.06■□□□□ 0
SHOX-204ENST00000554971 TMEM123Q8N131 208 aa15.06■□□□□ 0
SHOX-204ENST00000554971 KCNG3Q8TAE7 436 aa15.06■□□□□ 0
SHOX-204ENST00000554971 TINAGL1Q9GZM7 467 aaPredicted RBP15.06■□□□□ 0
SHOX-204ENST00000554971 PROCRQ9UNN8 238 aa15.06■□□□□ 0
SHOX-204ENST00000554971 MSTNO14793 375 aa15.05■□□□□ 0
SHOX-204ENST00000554971 LMX1BO60663 402 aa15.05■□□□□ 0
SHOX-204ENST00000554971 MRPL33O75394 65 aaKnown RBP15.05■□□□□ 0
SHOX-204ENST00000554971 RP2O75695 350 aa15.05■□□□□ 0
SHOX-204ENST00000554971 APOC1P02654 83 aa15.05■□□□□ 0
SHOX-204ENST00000554971 M6PRP20645 277 aa15.05■□□□□ 0
SHOX-204ENST00000554971 UNC119Q13432 240 aa15.05■□□□□ 0
SHOX-204ENST00000554971 MOGAT2Q3SYC2 334 aa15.05■□□□□ 0
SHOX-204ENST00000554971 ATPAF1Q5TC12 328 aaPredicted RBP15.05■□□□□ 0
SHOX-204ENST00000554971 C11orf88Q6PI97 169 aa15.05■□□□□ 0
SHOX-204ENST00000554971 OR10R2Q8NGX6 335 aa15.05■□□□□ 0
SHOX-204ENST00000554971 OR51E1Q8TCB6 317 aa15.05■□□□□ 0
SHOX-204ENST00000554971 PIGMQ9H3S5 423 aa15.05■□□□□ 0
SHOX-204ENST00000554971 PNRC2Q9NPJ4 139 aaKnown RBP15.05■□□□□ 0
SHOX-204ENST00000554971 KCNN3Q9UGI6 736 aa15.05■□□□□ 0
SHOX-204ENST00000554971 TMEM235A6NFC5 223 aa15.05■□□□□ -0
SHOX-204ENST00000554971 CLDN1O95832 211 aa15.05■□□□□ -0
SHOX-204ENST00000554971 CD8AP01732 235 aa15.05■□□□□ -0
SHOX-204ENST00000554971 ZNF35P13682 527 aa15.05■□□□□ -0
SHOX-204ENST00000554971 FOXG1P55316 489 aaPredicted RBP15.05■□□□□ -0
SHOX-204ENST00000554971 GK2Q14410 553 aaPredicted RBP15.05■□□□□ -0
SHOX-204ENST00000554971 HLXQ14774 488 aaPredicted RBP15.05■□□□□ -0
SHOX-204ENST00000554971 PNLIPRP3Q17RR3 467 aa15.05■□□□□ -0
SHOX-204ENST00000554971 FBXL19-AS1Q494R0 122 aa15.05■□□□□ -0
SHOX-204ENST00000554971 ACTBL2Q562R1 376 aa15.05■□□□□ -0
SHOX-204ENST00000554971 TSPO2Q5TGU0 170 aa15.05■□□□□ -0
SHOX-204ENST00000554971 LIN54Q6MZP7 749 aa15.05■□□□□ -0
SHOX-204ENST00000554971 TMUB2Q71RG4 321 aa15.05■□□□□ -0
SHOX-204ENST00000554971 AAED1Q7RTV5 226 aa15.05■□□□□ -0
SHOX-204ENST00000554971 SLC25A42Q86VD7 318 aa15.05■□□□□ -0
SHOX-204ENST00000554971 ANGPTL5Q86XS5 388 aa15.05■□□□□ -0
SHOX-204ENST00000554971 ACBD4Q8NC06 268 aa15.05■□□□□ -0
SHOX-204ENST00000554971 TMEM54Q969K7 222 aa15.05■□□□□ -0
SHOX-204ENST00000554971 APH1AQ96BI3 265 aa15.05■□□□□ -0
SHOX-204ENST00000554971 C10orf35Q96D05 121 aa15.05■□□□□ -0
SHOX-204ENST00000554971 CHST6Q9GZX3 395 aa15.05■□□□□ -0
SHOX-204ENST00000554971 SLC7A10Q9NS82 523 aa15.05■□□□□ -0
SHOX-204ENST00000554971 APCP25054 2843 aa15.05■□□□□ -0
SHOX-204ENST00000554971 C19orf84I3L1E1 186 aa15.04■□□□□ -0
SHOX-204ENST00000554971 CFDP00746 253 aaPredicted RBP15.04■□□□□ -0
SHOX-204ENST00000554971 OR10K2Q6IF99 312 aa15.04■□□□□ -0
SHOX-204ENST00000554971 TRAPPC6BQ86SZ2 158 aa15.04■□□□□ -0
SHOX-204ENST00000554971 GJC3Q8NFK1 279 aa15.04■□□□□ -0
SHOX-204ENST00000554971 KCNJ16Q9NPI9 418 aa15.04■□□□□ -0
SHOX-204ENST00000554971 ASH2LQ9UBL3 628 aa15.04■□□□□ -0
SHOX-204ENST00000554971 FOXD3Q9UJU5 478 aaPredicted RBP15.04■□□□□ -0
SHOX-204ENST00000554971 ANAPC10Q9UM13 185 aa15.04■□□□□ -0
SHOX-204ENST00000554971 M0QYG6 137 aa15.04■□□□□ -0
SHOX-204ENST00000554971 NAT1P18440 290 aa15.04■□□□□ -0
SHOX-204ENST00000554971 MSR1P21757 451 aa15.04■□□□□ -0
SHOX-204ENST00000554971 ALDH3B1P43353 468 aa15.04■□□□□ -0
SHOX-204ENST00000554971 CBX5P45973 191 aa15.04■□□□□ -0
SHOX-204ENST00000554971 ASCL1P50553 236 aa15.04■□□□□ -0
SHOX-204ENST00000554971 ZNF121P58317 390 aaPredicted RBP15.04■□□□□ -0
SHOX-204ENST00000554971 PHYHD1Q5SRE7 291 aa15.04■□□□□ -0
SHOX-204ENST00000554971 AWAT2Q6E213 333 aa15.04■□□□□ -0
SHOX-204ENST00000554971 Q6ZSR3 168 aa15.04■□□□□ -0
SHOX-204ENST00000554971 ABHD12BQ7Z5M8 362 aaPredicted RBP15.04■□□□□ -0
SHOX-204ENST00000554971 COMMD7Q86VX2 200 aa15.04■□□□□ -0
SHOX-204ENST00000554971 ZNF100Q8IYN0 542 aa15.04■□□□□ -0
SHOX-204ENST00000554971 CHST4Q8NCG5 386 aa15.04■□□□□ -0
SHOX-204ENST00000554971 OR8B12Q8NGG6 310 aa15.04■□□□□ -0
SHOX-204ENST00000554971 OR13C8Q8NGS7 320 aa15.04■□□□□ -0
SHOX-204ENST00000554971 OR13C9Q8NGT0 318 aa15.04■□□□□ -0
SHOX-204ENST00000554971 SCARB1Q8WTV0 552 aa15.04■□□□□ -0
SHOX-204ENST00000554971 SLC6A7Q99884 636 aa15.04■□□□□ -0
SHOX-204ENST00000554971 IFT46Q9NQC8 304 aa15.04■□□□□ -0
SHOX-204ENST00000554971 PARPBPQ9NWS1 579 aa15.04■□□□□ -0
SHOX-204ENST00000554971 A0A0D9SG52 128 aa15.03■□□□□ -0
SHOX-204ENST00000554971 A0A0U1RQV5 110 aa15.03■□□□□ -0
SHOX-204ENST00000554971 CCKARP32238 428 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms