RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ZNF747Q9BV97 191 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 DDX28Q9NUL7 540 aaKnown RBP8.84□□□□□ -0.99
SHMT2-215ENST00000554656 ATPIF1Q9UII2 106 aa8.84□□□□□ -0.99
SHMT2-215ENST00000554656 MDFIC2A0A1B0GVS7 189 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 A0A1B0GWJ7 208 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 LOC110117498-PIK3R3F6TDL0 507 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 MAGEB4O15481 346 aaPredicted RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 RPP14O95059 124 aaKnown RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 ZFPL1O95159 310 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 CDRT1O95170 752 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 CYB5R3P00387 301 aaPredicted RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 ISG15P05161 165 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 UBCP0CG48 685 aaKnown RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 SELEP16581 610 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 TUBG1P23258 451 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 ANOS1P23352 680 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 MYL9P24844 172 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 TGFBR1P36897 503 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 RPS19P39019 145 aaKnown RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 PMELP40967 661 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 RORCP51449 518 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 PSMA6P60900 246 aaKnown RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 HOXA4Q00056 320 aaPredicted RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 DYNC1I2Q13409 638 aaKnown RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 KRTAP27-1Q3LI81 207 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 Q499Y3 187 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 ACSM3Q53FZ2 586 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 ESCO2Q56NI9 601 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 TMEM244Q5VVB8 128 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 CORO6Q6QEF8 472 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.83□□□□□ -1
SHMT2-215ENST00000554656 ZNF676Q8N7Q3 588 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 CCDC54Q8NEL0 328 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 MCFD2Q8NI22 146 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 GPR148Q8TDV2 347 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 MRI1Q9BV20 369 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 HDHD2Q9H0R4 259 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 RNF167Q9H6Y7 350 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 TMEM165Q9HC07 324 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 TUBG2Q9NRH3 451 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 FRRS1LQ9P0K9 344 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 PEX16Q9Y5Y5 336 aa8.83□□□□□ -1
SHMT2-215ENST00000554656 IQCF6A8MYZ5 107 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 F5H5P2 479 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 J3QW42 95 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 PSMD9O00233 223 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 PLATP00750 562 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
SHMT2-215ENST00000554656 OTX1P32242 354 aaPredicted RBP8.82□□□□□ -1
SHMT2-215ENST00000554656 SDC2P34741 201 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 KIR3DL2P43630 455 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 FOXL1Q12952 345 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 WDR38Q5JTN6 314 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 CFAP77Q6ZQR2 320 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 COLCA1Q6ZS62 124 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 CEACAM19Q7Z692 300 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 MOGAT3Q86VF5 341 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 PRSS35Q8N3Z0 413 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 BHLHE23Q8NDY6 225 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 OR8G5Q8NG78 346 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 OR6Q1Q8NGQ2 317 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 ACOT12Q8WYK0 555 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 AP3S1Q92572 193 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 UPRTQ96BW1 309 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 KCTD12Q96CX2 325 aaKnown RBP8.82□□□□□ -1
SHMT2-215ENST00000554656 KCNJ15Q99712 375 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 PDCD1LG2Q9BQ51 273 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 SLC30A2Q9BRI3 323 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 TMEM246Q9BRR3 403 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 SSBP3Q9BWW4 388 aaPredicted RBP8.82□□□□□ -1
SHMT2-215ENST00000554656 SP140LQ9H930 580 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 PNRC2Q9NPJ4 139 aaKnown RBP8.82□□□□□ -1
SHMT2-215ENST00000554656 CENPMQ9NSP4 180 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 OR5V1Q9UGF6 321 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 NUFIP1Q9UHK0 495 aaKnown RBP8.82□□□□□ -1
SHMT2-215ENST00000554656 TGP01266 2768 aa8.82□□□□□ -1
SHMT2-215ENST00000554656 VWFP04275 2813 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 TRBV5-7A0A0A0MS05 114 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 TRAV40A0A0B4J280 105 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 IGHV2-70DA0A0C4DH43 119 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 TMEM269A0A1B0GVZ9 245 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 PDCD5O14737 125 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 CD2P06729 351 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 RPS2P15880 293 aaKnown RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 HSD11B1P28845 292 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 BAMBIQ13145 260 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 TAF13Q15543 124 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 SLC9A3R2Q15599 337 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 HSD17B12Q53GQ0 312 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 SHISA2Q6UWI4 295 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 RBMS3Q6XE24 437 aaKnown RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 C9orf139Q6ZV77 190 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 ELMOD2Q8IZ81 293 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 MUC20Q8N307 709 aaPredicted RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 OR13G1Q8NGZ3 307 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 RGP1Q92546 391 aaPredicted RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 ITFG2Q969R8 447 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 APOBEC3DQ96AK3 386 aaPredicted RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 DERL3Q96Q80 235 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms