RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 IGHV4-59P01825 116 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 PEX2P28328 305 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 HTR1FP30939 366 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 CAPGP40121 348 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 UBE2E1P51965 193 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 PROK1P58294 105 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 ACSM1Q08AH1 577 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 RIPPLY1Q0D2K3 151 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 IKZF1Q13422 519 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 APOFQ13790 326 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 BLMHQ13867 455 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 DGUOKQ16854 277 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF829Q3KNS6 432 aaPredicted RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 AADACL4Q5VUY2 407 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TMEM236Q5W0B7 351 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 MEPCEQ7L2J0 689 aaKnown RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF679Q8IYX0 411 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 FGFRL1Q8N441 504 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 Q8N7P7 452 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TCEANCQ8N8B7 351 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 BBS1Q8NFJ9 593 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 OR5T2Q8NGG2 359 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 OR5R1Q8NH85 324 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 RHOXF1Q8NHV9 184 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 LINC01006Q8NI28 216 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 FAM81AQ8TBF8 368 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 PIGCQ92535 297 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TAF15Q92804 592 aaKnown RBP eCLIP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 RPL3LQ92901 407 aaKnown RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 SEH1LQ96EE3 360 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 SDSLQ96GA7 329 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 MRPL48Q96GC5 212 aaKnown RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 OR8B4Q96RC9 309 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 MBOAT4Q96T53 435 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 TEAD3Q99594 435 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 WDR13Q9H1Z4 485 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 MMP27Q9H306 513 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 MOB1AQ9H8S9 216 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 CLN6Q9NWW5 311 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 ONECUT1Q9UBC0 465 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 NKX1-2Q9UD57 310 aaPredicted RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 NUFIP1Q9UHK0 495 aaKnown RBP5.42□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF222Q9UK12 451 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 VPREB3Q9UKI3 123 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 RNF114Q9Y508 228 aa5.42□□□□□ -1.54
SLIRP-203ENST00000554074 IGKV1D-17A0A075B6S4 117 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 CCDC182A6NF36 153 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 DHRS7CA6NNS2 312 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF732B4DXR9 585 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 DLGAP1O14490 977 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 AKR7A2O43488 359 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 PRKYO43930 277 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 NOS1APO75052 506 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 SRSF10O75494 262 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 MTRF1O75570 445 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 RHBDL1O75783 438 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 DHRS3O75911 302 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 RPSAP08865 295 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 PSG2P11465 335 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 SELLP14151 372 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 GLRA1P23415 457 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 EPHA2P29317 976 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 POLR2IP36954 125 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 TGFBR2P37173 567 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 VHLP40337 213 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 GPM6AP51674 278 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 RIDAP52758 137 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 ADARB1P78563 741 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 TAF9Q16594 264 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 AANATQ16613 207 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 LRRC36Q1X8D7 754 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 ZIK1Q3SY52 487 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 MIDNQ504T8 468 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 PDLIM3Q53GG5 364 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF691Q5VV52 312 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 TMEM42Q69YG0 159 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 DHRS7BQ6IAN0 325 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 BRICD5Q6PL45 260 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 Q6ZSR3 168 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 Q6ZSV7 163 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 KCTD8Q6ZWB6 473 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 THAP5Q7Z6K1 395 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 POC1AQ8NBT0 407 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 BEND2Q8NDZ0 799 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 OR5D13Q8NGL4 314 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 HAVCR2Q8TDQ0 301 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 AQP3Q92482 292 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 H1FXQ92522 213 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 TFAP2CQ92754 450 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 IL4I1Q96RQ9 567 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 CNN2Q99439 309 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 ADI1Q9BV57 179 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 PBOV1Q9GZY1 135 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 Q9H521 79 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 GPR84Q9NQS5 396 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 SIRT7Q9NRC8 400 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 INPP5EQ9NRR6 644 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 TNFRSF19Q9NS68 423 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 SNTG1Q9NSN8 517 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms