RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RBFOX3A6NFN3 312 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 METTL15A6NJ78 407 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 NDUFC2-KCTD14E9PQ53 114 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 CCRL2O00421 344 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 TCAPO15273 167 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 BIRC5O15392 142 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 SLC31A1O15431 190 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 MAGEB4O15481 346 aaPredicted RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 CYTH3O43739 400 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 NDUFS5O43920 106 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 FAM189A1O60320 539 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HLA-AP01891 365 aaKnown RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 IGKV5-2P06315 115 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 MMP7P09237 267 aaPredicted RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 IGHV3-43DP0DP04 118 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HIST1H1CP16403 213 aaKnown RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 G0S2P27469 103 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HTR1DP28221 377 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HSD11B1P28845 292 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ADORA1P30542 326 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 IFNGR2P38484 337 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RAP1GDS1P52306 607 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 SMAGPQ0VAQ4 97 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 PPP1R1AQ13522 171 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 CASP8Q14790 479 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 GPNMBQ14956 572 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 SPA17Q15506 151 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ZNF630Q2M218 657 aaPredicted RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 CDNFQ49AH0 187 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ACSM3Q53FZ2 586 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 TTC32Q5I0X7 151 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HES5Q5TA89 166 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HHATQ5VTY9 493 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RSBN1Q5VWQ0 802 aaPredicted RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 FBXW9Q5XUX1 488 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ARL9Q6T311 187 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 CASP12Q6UXS9 341 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RTL4Q6ZR62 310 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 LGI3Q8N145 548 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 GAPTQ8N292 157 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RIBC1Q8N443 379 aaPredicted RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 SPICQ8N5J4 248 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 NEIL3Q8TAT5 605 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 PIGXQ8TBF5 258 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RXFP4Q8TDU9 374 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 PTH2Q96A98 100 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 DCPSQ96C86 337 aaKnown RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 OTUB2Q96DC9 234 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 MBOAT7Q96N66 472 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 RILPQ96NA2 401 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ZIM3Q96PE6 472 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 QKIQ96PU8 341 aaKnown RBP eCLIP1.63□□□□□ -2.15
SRP54-204ENST00000553923 SPACA5Q96QH8 159 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 TEAD3Q99594 435 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 FAAP24Q9BTP7 215 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 C19orf24Q9BVV8 132 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 OR11A1Q9GZK7 315 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 LHX5Q9H2C1 402 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 CENPHQ9H3R5 247 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 HRASLSQ9HDD0 168 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 MRPL40Q9NQ50 206 aaKnown RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 C12orf4Q9NQ89 552 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 DIABLOQ9NR28 239 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 SLC2A9Q9NRM0 540 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 SPANXB1Q9NS25 103 aaPredicted RBP1.63□□□□□ -2.15
SRP54-204ENST00000553923 CD84Q9UIB8 345 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 VAX2Q9UIW0 290 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 SLC7A11Q9UPY5 501 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 TRAPPC4Q9Y296 219 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ZNF257Q9Y2Q1 563 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 MTCH2Q9Y6C9 303 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 ENPP4Q9Y6X5 453 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 PDS5BQ9NTI5 1447 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 FRMPD3Q5JV73 1810 aa1.63□□□□□ -2.15
SRP54-204ENST00000553923 COL22A1Q8NFW1 1626 aaPredicted RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 A0A1W2PQL4 384 aaPredicted RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 LINC01619G3V211 115 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 H3BP45 60 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 PEX7O00628 323 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 AZIN1O14977 448 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SLC31A2O15432 143 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 STX10O60499 249 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 RAD1O60671 282 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SUPT3HO75486 399 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 MMP23AO75900 390 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SERF1AO75920 110 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SUPT7LO94864 414 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 NSA2O95478 260 aaKnown RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 MOSP00540 346 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 IGKV1D-16P01601 117 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 IGHV3-23P01764 117 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 BGLAPP02818 100 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 THY1P04216 161 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 HLA-DPB1P04440 258 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SLC2A1P11166 492 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 ZNF35P13682 527 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SPNP16150 400 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 ATF1P18846 271 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 GABRR1P24046 479 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 PSMA1P25786 263 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms