RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CDIPTO14735 213 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 ADAM20O43506 726 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 SRSF10O75494 262 aaKnown RBP6.98□□□□□ -1.29
PSEN1-209ENST00000553855 WNT2P09544 360 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 MUC1P15941 1255 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-209ENST00000553855 GABRB1P18505 474 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 GLRA1P23415 457 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 CD80P33681 288 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 PMELP40967 661 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 HSPA13P48723 471 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 CCR9P51686 369 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 OR12D2P58182 307 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 ADARB1P78563 741 aaKnown RBP6.98□□□□□ -1.29
PSEN1-209ENST00000553855 WDR38Q5JTN6 314 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 FAM201AQ5SY85 155 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 SFRP4Q6FHJ7 346 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF826PQ6ZT77 177 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 SLC36A1Q7Z2H8 476 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 STX19Q8N4C7 294 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 OR52I1Q8NGK6 324 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 OR2G2Q8NGZ5 317 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 CNIH3Q8TBE1 160 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 PP6455Q8WZ26 134 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 RORBQ92753 470 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 RPL3LQ92901 407 aaKnown RBP6.98□□□□□ -1.29
PSEN1-209ENST00000553855 BORCS8Q96FH0 119 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 TMEM80Q96HE8 168 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 RAX2Q96IS3 184 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 GPR173Q9NS66 373 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 SCN3BQ9NY72 215 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 AASSQ9UDR5 926 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 HHLA2Q9UM44 414 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 V9GYS6 101 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 RTTNQ86VV8 2226 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 PPIAL4CA0A0B4J2A2 164 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 FAM230AA0A1W2PPH8 454 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 H0YJX3 145 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 H3BSH0 61 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 NDUFB3O43676 98 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 CLIC3O95833 236 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 IGLV3-1P01715 115 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 CCL1P22362 96 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 PRKACBP22694 351 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 ANOS1P23352 680 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 CFHR2P36980 270 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 HAAOP46952 286 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 FUT6P51993 359 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 ATP1B3P54709 279 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 GMFBP60983 142 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 CSNK2BP67870 215 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 ALKBH1Q13686 389 aaKnown RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 HAGHLQ6PII5 290 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 WDR82Q6UXN9 313 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 WFDC3Q8IUB2 231 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 Q8N3U1 123 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 GCSAMQ8N6F7 178 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 SCCPDHQ8NBX0 429 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 C19orf18Q8NEA5 215 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 BPIFB6Q8NFQ5 453 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 OR13C3Q8NGS6 347 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 OR14K1Q8NGZ2 314 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 OR5AK2Q8NH90 309 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 NANPQ8TBE9 248 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 TSEN15Q8WW01 171 aaKnown RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 TMIGD2Q96BF3 282 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 C12orf43Q96C57 262 aaKnown RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 FOXRED1Q96CU9 486 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 CPNE2Q96FN4 548 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 MED30Q96HR3 178 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 FGF20Q9NP95 211 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 MRPS18AQ9NVS2 196 aaKnown RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 CAB39Q9Y376 341 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-209ENST00000553855 AUP1Q9Y679 476 aa6.97□□□□□ -1.29
PSEN1-209ENST00000553855 LOC105371242A0A075B767 164 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 TRBV2A0A0J9YWF9 115 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 A0A1B0GTI1 187 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 TMEM212A6NML5 194 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 A8MXK9 166 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 SRRM5B3KS81 715 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 F5H0A9 414 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 J3QRE1 110 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 J3QT63 122 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 MYL12BO14950 172 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 MAGEB3O15480 346 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 PHF1O43189 567 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ENSAO43768 121 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 WBP4O75554 376 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ECDO95905 644 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 GYPAP02724 150 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ISG15P05161 165 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 CD2P06729 351 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 THBS2P35442 1172 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 TAS2R43P59537 309 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ISL1P61371 349 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 SMN1Q16637 294 aaKnown RBP6.96□□□□□ -1.3
PSEN1-209ENST00000553855 SMIM21Q3B7S5 101 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 CCDC58Q4VC31 144 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 LRRC10Q5BKY1 277 aa6.96□□□□□ -1.3
PSEN1-209ENST00000553855 ARMCX4Q5H9R4 360 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms