RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IGFBP3P17936 291 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 IL32P24001 234 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 OR1E1P30953 314 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ARL2P36404 184 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 AQP2P41181 271 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 UBE2AP49459 152 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 CCR6P51684 374 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 UBE2MP61081 183 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 RPS21P63220 83 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 TNNC1P63316 161 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 IRF8Q02556 426 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SLC25A11Q02978 314 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF763Q0D2J5 394 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SLAQ13239 276 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 GINS1Q14691 196 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 Q3ZCU0 254 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 TPRG1LQ5T0D9 272 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 C6orf183Q5T699 404 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 FRMPD2BQ6IN97 320 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SLC25A25Q6KCM7 469 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 C16orf87Q6PH81 154 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ALKAL1Q6UXT8 129 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 C12orf54Q6X4T0 127 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 MBOAT2Q6ZWT7 520 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 COX15Q7KZN9 410 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 MRPL21Q7Z2W9 205 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SNX20Q7Z614 316 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SYCE1Q8N0S2 351 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 TCAIMQ8N3R3 496 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 OTUD6BQ8N6M0 293 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 LRRC75AQ8NAA5 344 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 HSD17B11Q8NBQ5 300 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 OR6Q1Q8NGQ2 317 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 OR6K6Q8NGW6 343 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF596Q8TC21 504 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 CD300LFQ8TDQ1 290 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ZFP90Q8TF47 636 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 PHF10Q8WUB8 498 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 LRRC29Q8WV35 223 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 RPUSD4Q96CM3 377 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 RCN3Q96D15 328 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 DNAJC19Q96DA6 116 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SMIM10Q96HG1 83 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 GPR21Q99679 349 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 PARP12Q9H0J9 701 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 DEFB127Q9H1M4 99 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 FBXO44Q9H4M3 255 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 TMEM38AQ9H6F2 299 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ARMC7Q9H6L4 198 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 CCL28Q9NRJ3 127 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 ZNHIT6Q9NWK9 470 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 SLC39A1Q9NY26 324 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 UVRAGQ9P2Y5 699 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 TP53TG5Q9Y2B4 290 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 KCNE3Q9Y6H6 103 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 HELZP42694 1942 aaKnown RBP2.1□□□□□ -2.07
SCFD1-210ENST00000553693 MYO9AB2RTY4 2548 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 RELNP78509 3460 aa2.1□□□□□ -2.07
SCFD1-210ENST00000553693 PTPRDP23468 1912 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SPTA1P02549 2419 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 FBN2P35556 2912 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 PTPN13Q12923 2485 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 FLNCQ14315 2725 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 IGHV1OR15-9A0A0B4J2B8 117 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 A0A1B0GVI7 797 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 OR6C74A6NCV1 312 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF726A6NNF4 738 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 GABRR3A8MPY1 467 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SIVA1O15304 175 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 POLR3GO15318 223 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-210ENST00000553693 YKT6O15498 198 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SLC37A4O43826 429 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SCELO95171 688 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 LCA5LO95447 670 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 HPRT1P00492 218 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 BGLAPP02818 100 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 IVLP07476 585 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ZDHHC11BP0C7U3 371 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ERGP11308 486 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 GFAPP14136 432 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 HMGA1P17096 107 aaKnown RBP2.09□□□□□ -2.07
SCFD1-210ENST00000553693 GABRG2P18507 467 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ATF6P18850 670 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 RAB5AP20339 215 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 MYL9P24844 172 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 BTCP35070 178 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 HRH1P35367 487 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 MAS1LP35410 378 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CEACAM3P40198 252 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CEACAM6P40199 344 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 MNAT1P51948 309 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CCNG1P51959 295 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 AP1S2P56377 157 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CDH17Q12864 832 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 MADCAM1Q13477 382 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 MOBPQ13875 183 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 FZD2Q14332 565 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 PDGFRLQ15198 375 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 STK11Q15831 433 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 GABRA6Q16445 453 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms